Gene Information

Name : Pmu_04640 (Pmu_04640)
Accession : YP_005176360.1
Strain : Pasteurella multocida 36950
Genome accession: NC_016808
Putative virulence/resistance : Virulence
Product : periplasmic iron-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 471964 - 472845 bp
Length : 882 bp
Strand : -
Note : -

DNA sequence : 
ATGCGTCGCTTAACTGTTATTTTAAGTGCAATTATGTTAGGTATTTTTACATCGCCTGCGTTTGCAAAATTCAAAGTTGT
CACTACGTTTACTGTGATTCAAGATATTGCTCAAAATGTTGCTGGTGATGCAGCCATTGTTGAGTCAATTACCAAACCGG
GTGCGGAAATTCATGATTATGAACCGACACCAAAAGATATCGTCAAAGCACAACATGCCGATCTCGTCTTATGGAATGGC
TTAAATCTTGAGCGTTGGTTTGAAAAATTCTTCGAAAACGTGAAAGATAAACCGGCTGTCGTTGTGACACAAGGAATCAC
GCCAATTTCAATTTATGAAGGTCCTTACAAAGATGCACCAAATCCACATGCTTGGATGTCAACATCAAATGCCTTAATTT
ATATTGAAAATATTAAAAATGCATTGGTGAAATATGATCCGAAAAATGCCGACATCTATGTCAAGAATGCAGAAAATTAT
GCAAATAAAATCAAACAATTAGACCAACCATTACGTGAAAAACTCGCCAAAATTCCTGAAGGTCAACGTTGGTTAGTGAC
CAGTGAAGGCGCCTTCAGCTACTTAGCAAAAGATTATGGCTTACAAGAAGCGTATTTATGGCCAATTAATGCGGAAGAAC
AAGGCACACCACAACAAGTGCGTCATGTAATTGAAACAGTACGCAAAAACAATATTCCTGTGGTGTTCAGTGAAAGTACC
ATTTCAGATAAACCTGCAAAACAAGTTGCCAAAGAAACGGGAGCAAAATACGGTGGTGTACTTTATGTAGATTCCTTATC
TACTGCTAAAGGACCAGTACCAACCTATATTGATTTATTAAATACCACTGTTTCCACTATTGTTAAAGGATTTGAAAAAT
AA

Protein sequence : 
MRRLTVILSAIMLGIFTSPAFAKFKVVTTFTVIQDIAQNVAGDAAIVESITKPGAEIHDYEPTPKDIVKAQHADLVLWNG
LNLERWFEKFFENVKDKPAVVVTQGITPISIYEGPYKDAPNPHAWMSTSNALIYIENIKNALVKYDPKNADIYVKNAENY
ANKIKQLDQPLREKLAKIPEGQRWLVTSEGAFSYLAKDYGLQEAYLWPINAEEQGTPQQVRHVIETVRKNNIPVVFSEST
ISDKPAKQVAKETGAKYGGVLYVDSLSTAKGPVPTYIDLLNTTVSTIVKGFEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-95 65
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-95 65
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-95 65
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-95 65
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-95 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmu_04640 YP_005176360.1 periplasmic iron-binding protein BAC0439 Protein 2e-103 77
Pmu_04640 YP_005176360.1 periplasmic iron-binding protein BAC0349 Protein 1e-95 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmu_04640 YP_005176360.1 periplasmic iron-binding protein VFG0525 Protein 1e-95 65