Gene Information

Name : Pmu_04630 (Pmu_04630)
Accession : YP_005176359.1
Strain : Pasteurella multocida 36950
Genome accession: NC_016808
Putative virulence/resistance : Virulence
Product : iron transport system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 471071 - 471964 bp
Length : 894 bp
Strand : -
Note : -

DNA sequence :
ATGCCCTCTCCTACCATTGCATCCATTTCAGTCAATGATGTCACTGTTCGTTATAACAATGGACACCTTGCAATTTATGA
TACGACCTTTAACTTAGAAGGCGGTACAACTTGTGCTTTGGTAGGTGTGAATGGCAGTGGAAAATCCACCATTTTCAAAA
GCCTGATGGGATTGGTTAAGCCACAAAAAGGCGAAATTAAACTTTGTGGCTTGCCAATTTCAGCGGCGTTGAAACAAAAT
CTCGTTGCTTATGTGCCTCAATCAGAAGATGTTGACTGGCAGTTTCCCGTTTCCGTCTATGATGTTGTGATGATGGGACG
CTATGGTTATATGAACTTTTTACGTATGCCAAAAGCGATTGACAAACAAAAAGTAAAAGAAGCTATGCAACGCGTCAATA
TTGAACATCTTGCTGATCGCCAAATTGGTGAGTTATCTGGTGGTCAAAAAAAACGGGTGTTCTTAGCACGTGCCCTTGCC
CAACAAAGTAAAATTATTCTGTTAGATGAACCCTTCACTGGCGTTGATGTAAAAACGGAAAATGCGATTATGGCATTGTT
GGATCAACTACGAAGTGAAGGGCATTTAATTTTAATTTCTACCCATAACTTAGGTACTGTACCTGATTTCTGTGATCAAG
TGGTGATGATTAACCGCACTGTATTAGCGGCAGGTAAAACGGAAACAACCTTTACACAACGAAATCTCGAATTAGTCTTC
GGTGGGGTGTTACGTCATATTAAATTACTTGGAAAAGATATCCACGATGATGAGGATAGCCGCTCCGTTACCGTATTAAG
TGATGATGAACTTCCTGCTGTCTTCTATGGTGAAACGAAAAATGATCCGCCCGCACCTATTACTAAACACCCTCAACGAA
AAGGCGAACAATAA

Protein sequence :
MPSPTIASISVNDVTVRYNNGHLAIYDTTFNLEGGTTCALVGVNGSGKSTIFKSLMGLVKPQKGEIKLCGLPISAALKQN
LVAYVPQSEDVDWQFPVSVYDVVMMGRYGYMNFLRMPKAIDKQKVKEAMQRVNIEHLADRQIGELSGGQKKRVFLARALA
QQSKIILLDEPFTGVDVKTENAIMALLDQLRSEGHLILISTHNLGTVPDFCDQVVMINRTVLAAGKTETTFTQRNLELVF
GGVLRHIKLLGKDIHDDEDSRSVTVLSDDELPAVFYGETKNDPPAPITKHPQRKGEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-72 63
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-71 63
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-72 63
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-71 62
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-71 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmu_04630 YP_005176359.1 iron transport system ATP-binding protein BAC0440 Protein 2e-98 71
Pmu_04630 YP_005176359.1 iron transport system ATP-binding protein BAC0350 Protein 8e-72 62
Pmu_04630 YP_005176359.1 iron transport system ATP-binding protein BAC0400 Protein 6e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmu_04630 YP_005176359.1 iron transport system ATP-binding protein VFG0526 Protein 8e-72 62