Gene Information

Name : Pmu_04610 (Pmu_04610)
Accession : YP_005176357.1
Strain : Pasteurella multocida 36950
Genome accession: NC_016808
Putative virulence/resistance : Virulence
Product : iron transport system membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 469370 - 470209 bp
Length : 840 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTGATATCATCAATTGGTTTGTTGAACCTTTCTTGTATCCTTTTATGCAAAATGCCCTCTTCACCGCACTGATCGT
TGCGATTATATGTGCGGTGCTTTCCTGCTATTTAGTCTTAAAAGGTTGGTCATTAATGGGCGATGCAATTTCACATGCTG
TCTTGCCGGGAATTGTCATTGCATTTATGCTTGGTTTACCACTCACTTTTGGCGCATTTGGTGCAGGCTTATTTTGTGCA
TTAAGCGTCGGTTATCTGAAAGAAAATAGCCGTATTAAAGAAGATACCGTAATGGGGATTGTTTTTTCTGGGATGTTTGC
CTTTGGTATCGTTTTGTTTACGAAAGTCGAAACAGAACAGCACCTTACCCACATTTTATTTGGTAATCTGTTGGGTGTTA
GTCGTGCTGAGTTAGTGCAAACTTTTATTATTGCAACAATCATTTTTGTCATCATGATGCTTAAACGTCGTGACTTCTTG
CTTTATTGCTTTGATCAAAGTCATACCCGCGTCGCAGGGCTTTCACCTCGGCTATTACACTATGGCTTACTGGTCTTACT
TGCCTTAACCATTATCATGGCGATGCAAGTGGTCGGGGTGATTTTAGTGGTTGCTATGTTAATTTCACCGGGTATCACTG
CTTTTTTATTAAGTAAGCGTTTCGACATCATGCTCCTCATTGCAATTTGTATGTCTGTCATCACCAGTATTTTTGGGACA
ATTATTAGTTATCATATTGACGCAGCAACAGGACCTTGCATTATTTTATTACAAGCCATGTTCTTTACGCTCGCATTAGG
ATATCAAAAAGTAAAATGGCACATACAAAAGCCAATTTAA

Protein sequence : 
MADIINWFVEPFLYPFMQNALFTALIVAIICAVLSCYLVLKGWSLMGDAISHAVLPGIVIAFMLGLPLTFGAFGAGLFCA
LSVGYLKENSRIKEDTVMGIVFSGMFAFGIVLFTKVETEQHLTHILFGNLLGVSRAELVQTFIIATIIFVIMMLKRRDFL
LYCFDQSHTRVAGLSPRLLHYGLLVLLALTIIMAMQVVGVILVVAMLISPGITAFLLSKRFDIMLLIAICMSVITSIFGT
IISYHIDAATGPCIILLQAMFFTLALGYQKVKWHIQKPI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-58 52
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-58 52
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-58 52
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-58 52
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-58 52
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-46 41
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-46 41
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-46 41
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-46 41
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmu_04610 YP_005176357.1 iron transport system membrane protein BAC0442 Protein 2e-79 65
Pmu_04610 YP_005176357.1 iron transport system membrane protein BAC0352 Protein 8e-59 52
Pmu_04610 YP_005176357.1 iron transport system membrane protein BAC0441 Protein 6e-41 43
Pmu_04610 YP_005176357.1 iron transport system membrane protein BAC0351 Protein 6e-47 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pmu_04610 YP_005176357.1 iron transport system membrane protein VFG0528 Protein 8e-59 52
Pmu_04610 YP_005176357.1 iron transport system membrane protein VFG0527 Protein 6e-47 41