Gene Information

Name : Pmu_03080 (Pmu_03080)
Accession : YP_005176207.1
Strain : Pasteurella multocida 36950
Genome accession: NC_016808
Putative virulence/resistance : Unknown
Product : conjugative transfer region lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 311863 - 312261 bp
Length : 399 bp
Strand : -
Note : -

DNA sequence : 
ATGAAACATTTATTTTGCATAATGATAAGTGCCTTATTGATAACAGGTTGCACAACATCAACAGAAGAATTATTACCTAC
TAACGGCAGTACGATGCGGGATATTTGGGATAAAGGAGCGAGTAATAACGATCTACACTTATACCGTTCACAACAAGGGC
GAACACTTGACCCTGTCGATTATATTCCTAATAGTGAGCAACGAGCCTATACCCGTACGGCAGAAAATGAAATTAATAAC
TTGTTCCCTCGTTTACCTAATCCGGATCTGATTATGTATGTGTACCCACATCAAACTCGTTCCGGAGAGCCTCTCAGTAT
TCCAGGATATTCTACAGTACTACCTTTCTATGGACGAGTTCAATATGCTCAGCCGGGTGATAGAACAAGAGGGCTTTAA

Protein sequence : 
MKHLFCIMISALLITGCTTSTEELLPTNGSTMRDIWDKGASNNDLHLYRSQQGRTLDPVDYIPNSEQRAYTRTAENEINN
LFPRLPNPDLIMYVYPHQTRSGEPLSIPGYSTVLPFYGRVQYAQPGDRTRGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 6e-59 100
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 4e-20 46
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-24 46
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 8e-25 46
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 6e-19 46
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 2e-20 45
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 3e-24 45
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 7e-19 45
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 8e-23 43
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 8e-22 42
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 2e-21 41