Gene Information

Name : Pmu_03070 (Pmu_03070)
Accession : YP_005176206.1
Strain : Pasteurella multocida 36950
Genome accession: NC_016808
Putative virulence/resistance : Unknown
Product : conjugative transfer ATPase TraC-like, PFL family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 309023 - 311860 bp
Length : 2838 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTTTTTAAGTGAGGTATTTTCCTCTTTCAAACCGACTAAAGCAGGGGTTATATCAAGTGAACCAAATGAAAATAC
CGGTGAGTCTGACATCATTCAAAATAAAATGAGTGAGGTAAATAACGAGGTTCAACAATTAAAACGCAGTGGAAAACTCA
CCCAGTCACAGCATCACCGTCGGTTATACTCACAAGAGCCCTCCTTTATCGATCATCTACCTTGGGGAGAATATTTGAAT
GAGCACGGTGTGATACTCCTTGATGATGCCCGTAGTGTTGGGGCAGTATTTGATATTAAGCCGATTGGTACTGCTGGCCG
TAGTATTGAATTTTTAAGTCGGATACGTAATCTTGTCAAAGATGCCTTGCAAGACAGCTTTGATGAATTGGATGTAAATC
CGTACGTTGTTCAATTTTATTGCCAAGACAGCGATGATTTACAGCCTTATATTGAACAGCTACGAAATTATATCTCGCCT
ATCGCTAAAAATAGTGCATTTAGCGAAGAATGGTTACGGGTACAAGCCAAGCATTTCAAGGATATCGGTAAACCAGAGGG
GCTTTTTATTGATGAGCGAGTGACAAATACAGCTTGGTCTGGTCGTATACGTAGTACCAAAATGGTGATCTATCGGTATG
TTGATAAATCCAATGACACTAATGAAAATCTGATTGTCGAGCAGCTGAACAATGCTTGTTCTCGCATAAATGGAGCTCTA
ACAACTGCTGGATTACAATTGCAGCGACTGGATGGCGAACAATTTCGTCAATGGCTGTTACGTTGGTTTAATCCCAATCC
TTCTATTAATTTTGAGGGGTTAAGCAACAATGATTGCTACCATCTTTTTGGTAAACAAACCTCAAATGACGGGCTTCCAG
AATTAGCGTTTAACGATTTCAGTGAAGATTTATTTTATTCTCAACCGAAAAATGAAGGCAACTATTGGTATTTTGATGAC
CAACCGCACGAAGTTGTTGTAGTCAATAATTTGAGGAAACAACCGGAAGTGGGGTTGATGACTGGCGAGATTACTCGTGG
GCGTAATATCAATGCATTATTTGACTTGTTGCCGGAATCAACCATTATGGCAATTACCATCGTCATCCATCCACAGGATA
AGTTGGAGGCACATTTAGAAAAAATTAGTAGTCGAGCGGTAGGTGAAAATTTTGAGTCGAAATACCTAAAAGAAGACTGT
CAAACTGTACAGTCTTATCTTAAAGAGGGGCATAAACTCTATCAAGCAGCTATTGCATTTTACGTTCGAGGTAAGGATGA
AAAGGAGCTACGTACCCGTTCTCGCCAGTTGAGAACGATTCTGCTCAGTAACAACCTAGAACCCGTGAAGGAAAATGCAG
AAATTGCCCCACTTAACAGCTATTTGCGTTGGCTACCAATGAATTTTAATCCGCAGATGGATGCCAAATCACATTACTAC
ACGAAGTACTATTTTGTACAACATTTGGCAAACTTATTACCTATCTTTGGCCGAGATACCGGGACTGGGAATCCGGGGAT
CACTTACTTTAATCGAGGAGGAGCACCATTTAATTTCGACCCATTTAACCGTAAAGACAGAACCAAAAATGCTCACAAGC
TATTATTAGGTCCAACCGGTTCGGGAAAATCAGCTACGTTATGTGGGCAATTATGTCAGGCTATGGCCGTTTATCGCCCA
CGGACTTTTGTTGTTGAGGCAGGAAATTCATTTGGTTTATTAGCGGACTATGCAGAACGTTTCGGACTGACTGTAAATCG
CATTACGTTAGCTCCAAACAGCGGCATTGTCTTACCACTCTTTTCAGAAGCACATCGTCTATTGGATATGGAATTAAACC
CGGAAGATGTGCCGGAAGACATTGAGGATAACGATGACACTGATGATGAAGGTGATATGCAACGAGATTTATTGGCCGAA
ATGGAGCTGACGGCACGTTTGATGATCACCGGAGGTGAAAAGAAAGAAGATGAAAAAATGAGCCGTGCTGATCGTGCTGC
TATTCGTCGTGCCATTTTAAATGCAGCTCGCCAAACCAAATCTGAAGGCAGACAAACGCTGACTGAAGATATTAAAAATG
CTTTGGAAGCATTAAGTCATGATGAGCATACTCGTGAAGAACGGCGTACCCGTTTAGCAGAAATGGCAGAATCATTAGAA
ATGTTTTGTACCGGTGTAAATGGGCAATTTTTTAATCGAGAGGGGGCAATTTGGCCGGAGGCTGATCTAACCTTAGTTGA
TTTAGCTATGTTTGCCCGGGAAGGCTATGAAGCAGAGTTGGCCATTTCCTATATTTCACTCATTAACCATATCAACAGTC
TTGGTGAAAAATACCAACACAGTGATCGGATGATTCTGAATGTAACAGATGAATCACACATTATCACGGCCAACCCATTA
TTAGCTAAATTCCTAGTTAAAGGCTCAAAAATGTGGCGTAAACTAGGGATTTGGCTATGGCTTGCTACTCAAAATATGGA
TGACTTCCCGAATGAAGCGGCGAAATTACTCTCAATGGTCGAATGGTGGGAATTGTTGAATGTGTCTGCCAGTGAAATTG
ATGAAATCAATCGTTTCCGGAAACTGTCAGAGGCCCAGAAAACGATGTTGTTATCTGCCAAAAAATCAGATCGTAAATAT
ACCGAGGGCGTGGTATTAGCAACGAATATGGAAGCTCTATTCCGAGTTGTACCGCCTAGCTTATTTTTAGCTTTAGGAAT
GACTGAAAAACATGAAAAAGCAGAACGTAAGCAACTGATGATGCAGCACGGCTATACCGAACTCGATGCAGCTTTAGAGG
TTGCAGCTCGGATTGATAAAGCAAGAGGAATACACTAA

Protein sequence :
MSFLSEVFSSFKPTKAGVISSEPNENTGESDIIQNKMSEVNNEVQQLKRSGKLTQSQHHRRLYSQEPSFIDHLPWGEYLN
EHGVILLDDARSVGAVFDIKPIGTAGRSIEFLSRIRNLVKDALQDSFDELDVNPYVVQFYCQDSDDLQPYIEQLRNYISP
IAKNSAFSEEWLRVQAKHFKDIGKPEGLFIDERVTNTAWSGRIRSTKMVIYRYVDKSNDTNENLIVEQLNNACSRINGAL
TTAGLQLQRLDGEQFRQWLLRWFNPNPSINFEGLSNNDCYHLFGKQTSNDGLPELAFNDFSEDLFYSQPKNEGNYWYFDD
QPHEVVVVNNLRKQPEVGLMTGEITRGRNINALFDLLPESTIMAITIVIHPQDKLEAHLEKISSRAVGENFESKYLKEDC
QTVQSYLKEGHKLYQAAIAFYVRGKDEKELRTRSRQLRTILLSNNLEPVKENAEIAPLNSYLRWLPMNFNPQMDAKSHYY
TKYYFVQHLANLLPIFGRDTGTGNPGITYFNRGGAPFNFDPFNRKDRTKNAHKLLLGPTGSGKSATLCGQLCQAMAVYRP
RTFVVEAGNSFGLLADYAERFGLTVNRITLAPNSGIVLPLFSEAHRLLDMELNPEDVPEDIEDNDDTDDEGDMQRDLLAE
MELTARLMITGGEKKEDEKMSRADRAAIRRAILNAARQTKSEGRQTLTEDIKNALEALSHDEHTREERRTRLAEMAESLE
MFCTGVNGQFFNREGAIWPEADLTLVDLAMFAREGYEAELAISYISLINHINSLGEKYQHSDRMILNVTDESHIITANPL
LAKFLVKGSKMWRKLGIWLWLATQNMDDFPNEAAKLLSMVEWWELLNVSASEIDEINRFRKLSEAQKTMLLSAKKSDRKY
TEGVVLATNMEALFRVVPPSLFLALGMTEKHEKAERKQLMMQHGYTELDAALEVAARIDKARGIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 100
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 52
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 51
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 51
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 51
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 50
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 50
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 50
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 4e-173 49
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 49
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 47
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 47