Gene Information

Name : strB (Pmu_02760)
Accession : YP_005176179.1
Strain : Pasteurella multocida 36950
Genome accession: NC_016808
Putative virulence/resistance : Resistance
Product : aminoglycoside 6-phosphotransferase protein
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.72
Position : 280928 - 281764 bp
Length : 837 bp
Strand : -
Note : -

DNA sequence :
ATGTTCATGCCGCCTGTTTTTCCTGCTCATTGGCACGTTTCGCAACCTGTTCTCATTGCGGACACCTTTTCCAGCCTCGT
TTGGAAAGTTTCATTGCCAGACGGGACTCCTGCAATCGTCAAGGGATTGAAACCTATAGAAGACATTGCTGATGAACTGC
GTGGGGCCGACTATCTGGTATGGCGCAATGGGAGGGGAGCAGTCCGGTTGCTCGGTCGTGAGAACAATCTGATGTTGCTC
GAATATGCCGGGGAGCGAATGCTCTCTCACATCGTTGCCGAGCACGGCGACTACCAGGCGACCGAAATTGCAGCGGAACT
GATGGCGAAGCTGTATGCCGCATCTGAGGAACCCCTGCCTTCTGCCCTTCTCCCGATCCGGGATCGCTTTGCAGCTTTGT
TTCAGCGGGCGCGCGATGATCAAAACGCAGGTTGTCAAACTGACTACGTCCACGCGGCGATTATAGCCGATCAAATGATG
AGCAATGCCTCGGAACTGCGTGGGCTACATGGCGATCTGCATCATGAAAACATCATGTTCTCCAGTCGCGGCTGGCTGGT
GATAGATCCCGTCGGTCTGGTCGGTGAAGTGGGCTTTGGCGCCGCCAATATGTTCTACGATCCGGCTGACAGAGACGACC
TTTGTCTCGATCCTAGACGCATTGCACAGATGGCGGACGCATTCTCTCGTGCGCTGGACGTCGATCCGCGTCGCCTGCTC
GACCAGGCGTACGCTTATGGGTGCCTTTCCGCAGCTTGGAACGCGGATGGAGAAGAGGAGCAACGCGATCTAGCTATCGC
GGCCGCGATCAAGCAGGTGCGACAGACGTCATACTAG

Protein sequence :
MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLKPIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLL
EYAGERMLSHIVAEHGDYQATEIAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDPRRIAQMADAFSRALDVDPRRLL
DQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQTSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
strB AFV47971.1 streptomycin (6) phosphotransferase StrB Not tested AbaR25 Protein 2e-128 100
strB YP_005176179.1 aminoglycoside 6-phosphotransferase protein Not tested ICEPmu1 Protein 3e-128 100
strB AFV47999.1 streptomycin (6) phosphotransferase StrB Not tested delta-AbaR25 Protein 2e-128 100
strB AEQ20908.1 StrB, APH(6)-Id streptomycin(6) phosphtransferase Not tested Tn6166 Protein 3e-128 100
strB AEZ06048.1 StrB, APH(6)-Id, streptomycin(6) phosphotransferase Not tested Tn6167 Protein 3e-128 100
BJAB07104_00281 YP_008207746.1 Streptomycin 6-kinase Not tested AbaR25 Protein 6e-127 100
strB AEA34676.1 aminoglycoside resistance protein B Not tested Not named Protein 4e-127 100
BJAB0868_00285 YP_008211611.1 Streptomycin 6-kinase Not tested AbaR26 Protein 6e-127 100
strB ACK44538.1 StrB Not tested SGI1 Protein 2e-128 100
strB YP_001800933.1 aminoglycoside-6-phosphotransferase Not tested Not named Protein 6e-127 100
strB AGK07030.1 StrB streptomycin phosphotransferase Not tested SGI1 Protein 2e-128 100
ABK1_0257 YP_005512829.1 Streptomycin resistance protein B Not tested AbaR4d Protein 3e-128 100
strB AGK07088.1 StrB streptomycin phosphotransferase Not tested SGI1 Protein 2e-128 100
ABZJ_00265 YP_005524221.1 streptomycin 3''-kinase Not tested AbaR22 Protein 3e-128 100
strB AFH57206.1 streptomycin resistance protein Not tested AbaR4a Protein 2e-128 100
strB CAJ77026.1 Streptomycin phosphotransferase B Not tested AbaR1 Protein 5e-126 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
strB YP_005176179.1 aminoglycoside 6-phosphotransferase protein DQ464881.1.gene5.p01 Protein 1e-128 100
strB YP_005176179.1 aminoglycoside 6-phosphotransferase protein NC_010410.6003392.p0 Protein 3e-126 99
strB YP_005176179.1 aminoglycoside 6-phosphotransferase protein AF024602.1.gene6.p01 Protein 1e-128 99
strB YP_005176179.1 aminoglycoside 6-phosphotransferase protein AJ313522.gene.p01 Protein 1e-112 91