|
Name : vat (Pmu_21920) Accession : YP_005178003.1 Strain : Pasteurella multocida 36950 Genome accession: NC_016808 Putative virulence/resistance : Resistance Product : virginiamycin A acetyltransferase Function : - COG functional category : - COG ID : - EC number : 2.3.1.- Position : 2315859 - 2316482 bp Length : 624 bp Strand : - Note : - DNA sequence : ATGCGATTTCCTGATAAAGATCAGATTTTCCCTATCAAACATTATCACCGACTGTGCTTTTTAAAAAACTTAGTTCGTCA TCCTAATATTATTGTGGGGGATTTTACCTACTACGATGATGCAGAGAATGTGGAAAATTTTGAGAAAAATGTGAAATACC ATTTTGACTTTTTAGGCGATAAATTGATCATCGGTAAATTTTGCATGATTGGATCGGATGTGAAATTTATTATGAATGGC GCCAATCATCAAATGAATACCATCTCCACTTACCCATTTGGGATTTTTGGTTATGAATGGGCAAAAGCGTTACCGGAGAA AGCCGAATTATCGAGCAAAGGGGATACGATTATTGGGAATGACGTTTGGATTGGCTATAACGCCACGATTATGCCAGGCG TAAAAATTGGCGATGGCGCAATTATTGGCACAAATTCGGTTGTCACCAAGAATGTGCCACCTTATGCGATTGTCGCAGGA AATCCCGCTCGCGTGATTAGAAAACGTTTCTCACCTGAAAAAATTGAACAATTATTAGCATTAAAATGGTGGGATTGGGA GATTGAGAAAATCACGCGTAATCTTGACTTTTTAACTGGCAAAATCAGTGACCCGATTGAGTAA Protein sequence : MRFPDKDQIFPIKHYHRLCFLKNLVRHPNIIVGDFTYYDDAENVENFEKNVKYHFDFLGDKLIIGKFCMIGSDVKFIMNG ANHQMNTISTYPFGIFGYEWAKALPEKAELSSKGDTIIGNDVWIGYNATIMPGVKIGDGAIIGTNSVVTKNVPPYAIVAG NPARVIRKRFSPEKIEQLLALKWWDWEIEKITRNLDFLTGKISDPIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| catB3 | AFG30108.1 | chloramphenicol acetyltransferase | Not tested | PAGI-2 | Protein | 9e-30 | 45 |
| catB3 | AET25385.1 | chloramphenicol acetyltransferase | Not tested | PAGI-2(C) | Protein | 9e-30 | 45 |
| catB8 | YP_005797132.1 | chloramphenicol acetyltransferase | Not tested | AbaR4e | Protein | 1e-29 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| vat | YP_005178003.1 | virginiamycin A acetyltransferase | AM180355.1.gene2499. | Protein | 3e-45 | 48 |
| vat | YP_005178003.1 | virginiamycin A acetyltransferase | AY740681.1.gene5.p01 | Protein | 4e-30 | 45 |
| vat | YP_005178003.1 | virginiamycin A acetyltransferase | AF322577.2.gene4.p01 | Protein | 4e-30 | 45 |
| vat | YP_005178003.1 | virginiamycin A acetyltransferase | AY123251.gene2.p01 | Protein | 4e-30 | 44 |
| vat | YP_005178003.1 | virginiamycin A acetyltransferase | NC_002516.2.878374.p | Protein | 4e-29 | 44 |
| vat | YP_005178003.1 | virginiamycin A acetyltransferase | CP001581.1.gene990.p | Protein | 1e-32 | 43 |
| vat | YP_005178003.1 | virginiamycin A acetyltransferase | JF268688.1.gene6.p01 | Protein | 1e-29 | 43 |
