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Name : clpB (Pmu_20740) Accession : YP_005177888.1 Strain : Pasteurella multocida 36950 Genome accession: NC_016808 Putative virulence/resistance : Virulence Product : chaperone protein ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 2199593 - 2202160 bp Length : 2568 bp Strand : - Note : - DNA sequence : ATGAATATCGAAAAATTTACGACAAAATTTCAACAAGCGCTGCAAGAGGCGCAATCTTTAGCCATTGGCAAAGATAACCA ATTTATTGAACCCATCCATTTACTCACCGCTTTGTTAAATCAACAAGGTGGTTCCACTGCGCCAATTTTAACGGCAAGTG GGGCAAACTTACCGCTCTTGCGTAATGAATTAAATGCCGAGCTTAGTAAATTACCACAAGTGTCAGGCAGCGGTGGTGAT GTACAAGTTTCACGGAGTTTAGTGAATCTATTAAACTTGTGCGACAAGTTAGCACAGCAACGCCAAGATAAATTTATTTC CTCTGAATTGTTTTTACTGGCAGCGTTAGAAGACAAAACACTTGGTGATGTGTTGAAAAAGTGCGGTGTGAAAAAAGAAA ATTTACAACAGGCAATAGAGAAAGTCCGTGGCGGACAAAATGTGAATGATCCAAATGCGGAAGAAAGTCGCCAAGCGTTA GAAAAATATACGATTGATTTAACGGCGCGTGCAGAAAGCGGCAAACTTGACCCCGTGATTGGGCGTGATGAAGAAATTCG TCGTGCCATTCAAGTATTACAACGCCGTACTAAAAACAACCCAGTGTTAATCGGTGAACCGGGCGTGGGGAAAACTGCGA TTGTCGAAGGGCTGGCGCAACGCATTGTCAATGGTGAAGTACCCGAAGGCTTGAAAAATAAGCGCGTTCTGTCTTTAGAT ATGGGGGCATTGATTGCTGGTGCAAAATACCGTGGTGAATTTGAAGAACGTTTAAAAGCGGTGTTAAATGAACTGTCAAA AGAAGAAGGACGCGTGATTCTCTTTATTGATGAAATTCACACCATGGTGGGAGCAGGGAAAACCGATGGCGCGATGGATG CCGGTAACTTGCTCAAACCAAGCTTAGCCCGTGGGGAATTACACTGCGTGGGGGCGACGACACTAGATGAATATCGTCAA TACATAGAGAAAGATGCCGCCCTTGAGCGTCGTTTCCAAAAAGTGTTTGTTGGTGAGCCAACGGTGGAAGATACCATTGC GATCTTACGTGGGTTAAAAGAACGTTACGAAATCCACCACCATGTTCAAATTACTGACCCTGCGATCGTGGCGGCAGCGA CCCTTTCTCATCGTTATGTATCTGATCGTCAGCTACCTGATAAAGCGATTGATTTAATTGATGAAGCAGCATCGAGCATT CGTATGGAAATTGACTCTAAACCTCAGCCGTTAGATCGTTTAGAGCGCCGTATTATTCAATTAAAATTAGAGCAACAAGC GCTACAAAAAGAAGATGATGATGCGAGTCGTAAACGTTTAGCGATGCTTGAAAAAGAATTAGGTGAAAAAGAACGTGAAT ATGCGGAATTAGAAGATGTTTGGAAAGCTGAAAAAGCCGCCCTTTCAGGCACACAGCATATTAAAGCGGAGCTAGACAGT GCCAAAACACAAATGGAACAAGCTCGCCGTGCCAGTGACTTCGCAAAAATGTCGGAATTACAATACGGAGTGATCCCCGC GCTAGAAAAACAATTGGCGCAAGCAGAATCCGCTGAAGGCAAAGAAATGACTTTACTGCGCTATCGTGTGACCGACGAGG AAATTGCCGAAGTGCTTTCGCGCGCAACTGGTATTCCTGTGGCGAAGATGATGGAAGGGGAAAAAGAAAAACTCTTACGT ATGGAAGAAGAATTGCACAAACGAGTGATTGGTCAACATGAAGCCATTGAAGCAGTATCGAATGCAATTCGCCGTAGCCG TGCCGGGTTATCCGATCCAAATCGTCCAATTGGATCGTTCTTGTTCTTAGGTCCAACCGGGGTCGGGAAAACAGAACTTT GTAAAACCCTTGCCAATTTCCTGTTTGATGACGAAAACGCGATGGTGCGTATTGATATGTCAGAATTTATGGAAAAACAC AGTGTTTCACGCTTAGTGGGCGCCCCTCCAGGTTATGTGGGTTACGAAGAAGGCGGCTATTTAACCGAAGCCGTTCGTCG TCGCCCTTATTCCGTGATCTTGCTTGATGAAGTGGAAAAAGCACACCATGATGTGTTTAATATTTTATTACAAGTGTTAG ATGATGGACGCTTAACCGATGGACAAGGGCGCACCGTGGATTTCCGCAATACTGTGGTAATCATGACATCTAACTTAGGC TCACACTTGATCCAAGAAAACAGTACATTGGATTACTCAAGTATGAAAGAGTTAGTGATGTCTGTGGTGGGACAACATTT CCGCCCAGAATTTATCAACCGTATTGATGAAACCGTCGTCTTCCACCCATTAGGTAAAGAAAACATTCGTGAGATTGCGA CAATCCAACTTGCTCGCTTAATCAAACGTATGGAAAGCCATGGTTATCAATTACACTTCACCGATGCTTGCTTAGACTTT ATTGGCGAAGTAGGTTACGATCCGGTGTATGGCGCACGTCCGTTAAAACGTGCAATTCAACAAGAAATTGAGAACCCGTT GGCACAACAAATTCTGTCAGGCAAATTATTACCGAATCAATTAGTCACCATTGACTATGTTGACGGAAAAGTGATTGCCA ATCAGTAA Protein sequence : MNIEKFTTKFQQALQEAQSLAIGKDNQFIEPIHLLTALLNQQGGSTAPILTASGANLPLLRNELNAELSKLPQVSGSGGD VQVSRSLVNLLNLCDKLAQQRQDKFISSELFLLAALEDKTLGDVLKKCGVKKENLQQAIEKVRGGQNVNDPNAEESRQAL EKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLD MGALIAGAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQ YIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASSI RMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDS AKTQMEQARRASDFAKMSELQYGVIPALEKQLAQAESAEGKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLR MEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKH SVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG SHLIQENSTLDYSSMKELVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDACLDF IGEVGYDPVYGARPLKRAIQQEIENPLAQQILSGKLLPNQLVTIDYVDGKVIANQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-154 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_005177888.1 | chaperone protein ClpB | VFG2076 | Protein | 1e-103 | 41 |
