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Name : gabD (Pmu_18030) Accession : YP_005177634.1 Strain : Pasteurella multocida 36950 Genome accession: NC_016808 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 1924601 - 1926046 bp Length : 1446 bp Strand : + Note : - DNA sequence : ATGCAACAATTTTCCCTATTAAAAACCAAAGCCTATATTAATGGCGAGTATGTACAGGCAAAGGATCACAAAACCTTTGC GGTTACTAATCCAGCGAACCAACAAATCATTTGTGAGTTGCCAGATTTAAGCGCAGAAGAAACCGAATATGCGATTGCTT GCGCGGCACAAGCCCAGAAAAAGTGGCAAAAAGTCACGCCGAAAGAACGCGCGAATCTCTTACGCCGTTGGTATAACTTA GTCATTGAAAACCAAGAAGAATTAGCCCAATTACTGAGTTTAGAACAAGGTAAACCAATCAACGAAAGTCGCGGTGAGAT TTTATATGGCGCCAGTTTTATTGAATGGTTCGCGGAAGAAGCCAAACGTATTTATGGCGACGTGTTACCACAGGATAAAG AAAATCATCGTTTATTAGTGATTAAACAAGGCATTGGTGTGGTGGCAGCGATCACCCCGTGGAACTTCCCAAATGCGATG ATTACTCGTAAAGCCGCGCCAGCCTTTGCGGCAGGTTGTGCAATGGTATTAAAACCCGCACAGGAAACCCCACTTTCTGC ATTAGCGTTGGCAGAACTGGCACACCAAGCGGGCTTACCTGCGGGGCTATTTAATGTGATTACTTCAACTCGCTCCGTTG AAATTGGCAAAGTGCTAACCGAACATCCAACGGTACGTAAAGTGACCTTTACCGGTTCGACCCGTGTGGGCAAAATCCTG ATGGCGCAATCGGCGAGTACAGTGAAAAAATTGTCATTAGAACTAGGCGGCAACGCCCCGTCGATTGTGTTTGATGATGC GGATTTAGAGAATGCTATCGAGGGCATTATCGCCTCGAAATTCCGCAACAGTGGACAAACCTGCGTCTGTACTAACCGTA TTTATGTGCAAGCCGGCATTTATGACCGTTTTGTGGAACAATTTAGCGCCAAAGTGGCCGCCTTTAAAGTGGGCAGTGCC AATGAAGCCGGTGTCAACATTGGACCATTAATCAGTCAAAGTGCAGTCAATAAAATCCAAGAACACATCGACGATGCCAC CGCAAAAGGGGCAAATTTGGTGATCGGTGGTAAGCTTCATACGCGAGGCGGTACTTTCTTTGAACCGACCGTATTGCGAG ATGTGACCCAAGCGATGTTAGTGGCAAAAGACGAAACCTTCGCCCCATTGGCACCGGTGTTTAAATTTGATACCGAAGCA CAAGTGATCGAGATGGCAAATGATACTGAATTTGGCTTAGCCTCGTATCTTTACACCCAAGATATTTCTCGCATCTGGCG AGTTTCCGAAGCATTAGAATACGGTATTGTCGGCATTAACGAAGGCCTGATCAGCAATGAAATGGCGCCTTTTGGTGGCG TCAAAGAATCCGGCTTAGGTCGCGAAGGCTCTCGCTACGGCATCGACGAGTTTTTAGAAATCAAATACCTTTGTTTGAAA GTGTAA Protein sequence : MQQFSLLKTKAYINGEYVQAKDHKTFAVTNPANQQIICELPDLSAEETEYAIACAAQAQKKWQKVTPKERANLLRRWYNL VIENQEELAQLLSLEQGKPINESRGEILYGASFIEWFAEEAKRIYGDVLPQDKENHRLLVIKQGIGVVAAITPWNFPNAM ITRKAAPAFAAGCAMVLKPAQETPLSALALAELAHQAGLPAGLFNVITSTRSVEIGKVLTEHPTVRKVTFTGSTRVGKIL MAQSASTVKKLSLELGGNAPSIVFDDADLENAIEGIIASKFRNSGQTCVCTNRIYVQAGIYDRFVEQFSAKVAAFKVGSA NEAGVNIGPLISQSAVNKIQEHIDDATAKGANLVIGGKLHTRGGTFFEPTVLRDVTQAMLVAKDETFAPLAPVFKFDTEA QVIEMANDTEFGLASYLYTQDISRIWRVSEALEYGIVGINEGLISNEMAPFGGVKESGLGREGSRYGIDEFLEIKYLCLK V |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-140 | 63 |
