Gene Information

Name : vipA (Pmu_01590)
Accession : YP_005176086.1
Strain : Pasteurella multocida 36950
Genome accession: NC_016808
Putative virulence/resistance : Virulence
Product : Vi polysaccharide biosynthesis protein VipA/TviB
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.-
Position : 164345 - 165619 bp
Length : 1275 bp
Strand : -
Note : -

DNA sequence : 
ATGAATATTGAAAAATTAAAAATTGGCATCATTGGTCTTGGTTACGTTGGACTACCTATCGCTGTGGAATTCGGTAAAAA
AGTCCCTACGGTGGGTTTTGATATTAATGAAAAACGTGTCAAATCACTGGCGTCAGGTAAAGATTACACATTAGAAGTGT
CTGGAGAGGAATTACAACATGCCTCCAAATTACGTTATACAAACCAAACCAAAGGGTTAGAAGAATGTAATTTCTTTATT
GTGACAGTTCCCACTCCGATCGATCATTACAAACAACCAGATCTTAAACCCCTAATAAAAGCCTCAGAAACTATCGCAGA
AGTATTGAAAAAGGGGGATGTCGTTGTATATGAATCGACAGTTTATCCTGGTGCGACTGAAGAAATTTGTGTGCCTGTAC
TTGAAAAAATGTCAGGTTTGAAATTTAACCATGACTTCTTTGTCGGTTATAGCCCCGAGCGGATTAATCCTGGTGATAAA
GAACATCGTGTTACGAATATTTTAAAAATTACATCCGGTTCAACTCCACTTGTCGCCAATTATATCGACTTCGTTTATAA
GCTCATTATAAAAGCGGGAACACATCAAGCCCCAAGCATCAAAGTGGCTGAAGCCGCTAAAGTAATTGAAAATACACAAC
GAGATGTCAATATCGCCCTGATTAATGAACTTACCTTAATCTTCAACAAAATGGGGATTGATACCGAAGATGTGTTAAAC
GCGGCAGGAACGAAATGGAATTTTTTACCTTTTAAACCCGGTTTGGTAGGCGGGCACTGTATTGGCGTAGATCCTTATTA
TTTAACACACAAAGCACAGTCACTGGGCTTACATCCCGAAATCATTCTTGCTGCACGCCGTTTAAATGACCGTATGGGAG
AATATGTCGCGACACAACTCATTAAAGAAATGGTGAAAAAAGACATTCCCGTGGTCAATTCTAAGATTTTAGTGATGGGT
TTGAGTTTCAAAGAAAATTGTCCAGATATACGTAATACCAAAATTATTGATCTCGTTAATTCATTAAAAGAATACGACAT
TGATATTGATATCTACGATCCTTGGGTAGATAAATACGAAGCAGAAGCAGAATATGGCTTAACACCAATCACAGAGATTC
ATTCACATAACTATGATGCCATTATTATCGCCGTTGCACATCAACAATTTAAGTGTATGACGGAAAAAGATTTTAAAGCA
TTAGGGAAAGAAAATTTTGTCCTTTATGACCTGAAATATGTGTTAGATCAATCTCAAGCCAATATTAGATTATGA

Protein sequence : 
MNIEKLKIGIIGLGYVGLPIAVEFGKKVPTVGFDINEKRVKSLASGKDYTLEVSGEELQHASKLRYTNQTKGLEECNFFI
VTVPTPIDHYKQPDLKPLIKASETIAEVLKKGDVVVYESTVYPGATEEICVPVLEKMSGLKFNHDFFVGYSPERINPGDK
EHRVTNILKITSGSTPLVANYIDFVYKLIIKAGTHQAPSIKVAEAAKVIENTQRDVNIALINELTLIFNKMGIDTEDVLN
AAGTKWNFLPFKPGLVGGHCIGVDPYYLTHKAQSLGLHPEIILAARRLNDRMGEYVATQLIKEMVKKDIPVVNSKILVMG
LSFKENCPDIRNTKIIDLVNSLKEYDIDIDIYDPWVDKYEAEAEYGLTPITEIHSHNYDAIIIAVAHQQFKCMTEKDFKA
LGKENFVLYDLKYVLDQSQANIRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-132 66
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-132 66
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-103 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vipA YP_005176086.1 Vi polysaccharide biosynthesis protein VipA/TviB VFG0431 Protein 1e-132 66