Gene Information

Name : MI1_04485 (MI1_04485)
Accession : YP_005174319.1
Strain : Leuconostoc mesenteroides J18
Genome accession: NC_016805
Putative virulence/resistance : Virulence
Product : ABC-type Mn2+/Zn2+ transport systems, permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 953738 - 954580 bp
Length : 843 bp
Strand : +
Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components

DNA sequence : 
ATGCATAGTATTGAATTATTCATTGACGGACTAACAAAATATAATTTCTTGCAAACAGCATTAGTTACATCGATATTAGT
TGGTATTATGTCAGGAATTATCGGGTCCTTCATCATATTACGAGGCATGTCTTTAATGGGTGATGCAATTTCGCATGCCG
TATTACCTGGTGTTGCGGTTGCCTACATGCTCGGGATTAACTTGTTACTCGGTGCTTCTGCCTTTGGTATTTTGGCAGCA
TTACTAATCGGTGTTGTCACGATGAAGTCAAAGTTGAAAAATGACACAGCCATAGGAATCGTATTTTCAGCTTTCTTCGC
ATTGGGATTTATTCTTATTTCATTGGCAGAGTCTGCTACTAATTTGCATCACATTTTATTTGGAAACGTCTTAGCTGTTT
CTGACAGTGATTTAATTACTACTGCAATCGTGCTTTCTATAGTATTATTGTTTGTTGTTACCTTTTACAAAGAGTTACTT
ATCACATCATTTGACAATACTTTTGCTAAAGCCTATGGTCTTAAAACTCAAATTATGCATTACGCTCTAATGCTTGTTTT
GACCTTAGTTACGGTGACAGCTTTGCAAACAGTCGGAATTATCTTAATTGTGGCCATGTTAATTACACCAGCAGCTACGG
CTTACTTGTTAACAAATCGTATGTCTCATATGATGATTGTTGCTGCTATCTTTTCTGTAATATCATCAATTGTAGGCTTG
TACCTGAGTTTCACATTTAACTGGGCGTCAGGTCCTGCAATTGTTCTTACAGCAGCAATTTTCTTTACATTGGCCTTTAT
CTTTTCACCAAAACAAGGCATTGTCTTCAAAAGAAAGTCTTAA

Protein sequence : 
MHSIELFIDGLTKYNFLQTALVTSILVGIMSGIIGSFIILRGMSLMGDAISHAVLPGVAVAYMLGINLLLGASAFGILAA
LLIGVVTMKSKLKNDTAIGIVFSAFFALGFILISLAESATNLHHILFGNVLAVSDSDLITTAIVLSIVLLFVVTFYKELL
ITSFDNTFAKAYGLKTQIMHYALMLVLTLVTVTALQTVGIILIVAMLITPAATAYLLTNRMSHMMIVAAIFSVISSIVGL
YLSFTFNWASGPAIVLTAAIFFTLAFIFSPKQGIVFKRKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 2e-44 58
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 2e-44 58
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-31 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-31 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 4e-31 42
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-31 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MI1_04485 YP_005174319.1 ABC-type Mn2+/Zn2+ transport systems, permease component BAC0352 Protein 2e-31 42
MI1_04485 YP_005174319.1 ABC-type Mn2+/Zn2+ transport systems, permease component BAC0442 Protein 4e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MI1_04485 YP_005174319.1 ABC-type Mn2+/Zn2+ transport systems, permease component VFG0528 Protein 2e-31 42