Gene Information

Name : MI1_02565 (MI1_02565)
Accession : YP_005173939.1
Strain : Leuconostoc mesenteroides J18
Genome accession: NC_016805
Putative virulence/resistance : Virulence
Product : ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 536349 - 538403 bp
Length : 2055 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGGCACAACAAGATTCGTTTGGTTTTGGTAATTTAGATGAAATGTTTCGCGCAATGAATGAACAAATGGCGCAAGCACA
AGGACAACAAAATACACAAGCACAAAAAAATAATAATGGTAATAAAAAAAGACGCTTACTTGATGAGTTTGGTATTAATT
TAACCAAACAAGCTCGCGACAAAAAGCTCGACCCTGTTATTGGTCGAGATAACGAAGTTGCTCGCACAATTGAAATTTTA
AATCGTCGTACAAAGAATAATCCAGTACTAATTGGTGAACCTGGTGTTGGTAAAACAGCTATTGTTGAAGGCCTAGCGCA
AGCTATTGTGGCTGGAAAGGTGCCTGAAAAGTTACAGCATAAAGAAGTTATTCGTTTGGAAATGTCGGCCTTAGTTCAAG
GTACGAGCATGCGTGGTCAATTCGAAGCACGGATGCGTGAATTAATGAAAGAAGTTACGAGCAGCGATGATGTCATCTTG
TTCATTGATGAAATTCATGAAATTATGGGTGCCGGAAATGCTGAAGGTGGTATGGATGCAGGTAATATTTTGAAGCCTGC
CCTAGCTCGTGGTGAGTTCCAATTAATCGGTGCAACAACTTTAAATGAGTATCGAAAAATTGAAAAAGATGGTGCTATTG
CCCGTCGTTTCCAGCCAGTGCAAGTCGAAGAACCCTCTAAAGAAGAAACTATCACGATTTTAGAAGGAATTAGTGAACGG
TATGAAAAGTATCACTATGTTACATTCAGTGATTCTGCCCTTCAAGCAGCTGTTGAACTATCTGATCGTTACATTCCAGA
AAGATTCCTACCGGATAAAGCAATTGATTTACTTGATGAAGCTGGCTCACGTAAAAATTTGACAATGAAAGTTGCGGACC
CCAAAACTATTCAAGTGAATATCGAAGCAGCTGATAAATTAAAGCAAGAAGCAATTGATAAAGAAGATTTTGAAAAAGCA
AGCTATTGGCGTGATCAGGTAAACCAACTTGAGTCACAAAAGGCACAAGTCGAGGCTCACCCCGAGATGTCAAAGCCACA
AACAGTAACAGAGCAAGATATATTAAAAATTGTTGAAGATAAAACTGATATTCCGGTCGGAGCTTTAAAAGAAAACGAGG
CTAATCAACTAAAAGATTTGGATAAAAACTTATCGAAACATGTAATTGGTCAAGATGAGGCAGTAGAAAAACTAGCCAAG
GCGATTCGACGTAATCGTATTGGTCTAACAAAATCTGGTCGTCCAATTGGATCATTCCTATTTGTCGGGCCGACCGGTGT
TGGTAAAACTGAAACTGCCAAGCAATTAGCTAAGGAAATGTTTGGTAGCAAAGATACTATGATTCGTTTCGACATGTCAG
AGTACATGGAAAAACATACCGTTTCTAAAATGATTGGTGCTCCTGCCGGTTATGTCGGTTACGAAGAGGCTGGTCAATTA
ACAGAACAAGTTCGCCGTCGTCCCTACTCATTGGTTCTCTTTGATGAAATAGAAAAAGCACATCCAGATGTAATGAACAT
GTTCTTACAGATTCTTGATGATGGCCGTCTAACTGATGCACAAGGTCACATAGTGAGTTTCAAAGACACTGTCATTATTA
TGACTTCTAACGCTGGTTCAACAGACACAGGAAATACACCTGTGGGATTCGCCCAAGTTGATCAACAAAATCGTTTGATG
CAACGTTTGGAAAATTATTTCCGTCCAGAGTTCTTGAACCGTTTAGACGATATCATTGATTTCCAACCTTTGTCACAAGA
TCATCTACTAAAAATTGTCGACTTGTTATTAACTGATATGAATGATAACTTGTCTGACAACGATTTGCACATTGATTTAA
GCACTGCTGCTAAGCAGAAATTAGTGGAGCTCGGTTATGACCCTGCAATGGGTGCTCGACCTCTCCGTCGTGTCATGCAA
GATAAAATCGCCGATGGTATCGCCGATTTCTATTTAGAACACCCAGATGTTCATCATTTGCAAGCTGACATTGTTCATAA
TGAATTTGTTATTAGTGAAGTTAAGCCAGAACCAGTTACTGTAAATAAAATTTAA

Protein sequence :
MAQQDSFGFGNLDEMFRAMNEQMAQAQGQQNTQAQKNNNGNKKRRLLDEFGINLTKQARDKKLDPVIGRDNEVARTIEIL
NRRTKNNPVLIGEPGVGKTAIVEGLAQAIVAGKVPEKLQHKEVIRLEMSALVQGTSMRGQFEARMRELMKEVTSSDDVIL
FIDEIHEIMGAGNAEGGMDAGNILKPALARGEFQLIGATTLNEYRKIEKDGAIARRFQPVQVEEPSKEETITILEGISER
YEKYHYVTFSDSALQAAVELSDRYIPERFLPDKAIDLLDEAGSRKNLTMKVADPKTIQVNIEAADKLKQEAIDKEDFEKA
SYWRDQVNQLESQKAQVEAHPEMSKPQTVTEQDILKIVEDKTDIPVGALKENEANQLKDLDKNLSKHVIGQDEAVEKLAK
AIRRNRIGLTKSGRPIGSFLFVGPTGVGKTETAKQLAKEMFGSKDTMIRFDMSEYMEKHTVSKMIGAPAGYVGYEEAGQL
TEQVRRRPYSLVLFDEIEKAHPDVMNMFLQILDDGRLTDAQGHIVSFKDTVIIMTSNAGSTDTGNTPVGFAQVDQQNRLM
QRLENYFRPEFLNRLDDIIDFQPLSQDHLLKIVDLLLTDMNDNLSDNDLHIDLSTAAKQKLVELGYDPAMGARPLRRVMQ
DKIADGIADFYLEHPDVHHLQADIVHNEFVISEVKPEPVTVNKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-157 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MI1_02565 YP_005173939.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones VFG0080 Protein 0.0 58
MI1_02565 YP_005173939.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones VFG0079 Protein 2e-158 51