Gene Information

Name : MI1_00700 (MI1_00700)
Accession : YP_005173568.1
Strain : Leuconostoc mesenteroides J18
Genome accession: NC_016805
Putative virulence/resistance : Virulence
Product : ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 157328 - 159808 bp
Length : 2481 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGGATAATAATTATACACCAAGTGCGCAAAATGTATTGGTTTTGGCACAGGAACAAGCAAAGTATTTTAAGCACCAAGC
TGTGGGTACAGAACATCTTTTACTCGCCCTAGCAATAGAAAAAGAAGGCATCGCCAGTAAGATATTAGGTCAGTTTAATG
TTATGGACGATGATATTCGTGAGGAAATTGAACACTTTACAGGATATGGTATCACTAGTCGGTATGATAAAAACATCTAT
TTACCTTATTCACCAAAAGCGGCAGATATTTTACATCAAGCGAATGAAGAGTTGCGTGCTTTAGCACAATCAAAAGTTGG
AACAGAGCACATTTTGTTAGCTTTATTACAGGATGAAAGCATACTATCTTCACGAATTTTACTAGCATTAGACGTTAATT
TACAAGATATGCGTCGTGCAATTCTTCGAAAATTAGGCATTACTGATGTGCGGAAGCAAATGAAGCAACAGGAGAAGCAG
CAAGCATCAGCGGGAACGCCTACTTTAGATGGATTGGCACGTGATTTGACTCAAATGGCGCGAGACAACAAAATTGATCC
AGTAATCGGTCGCCCAAAGGAGGTTCGTCGTGTTATACAAATACTATCCAGACGAACAAAAAACAATCCTGTATTGATTG
GAGAACCTGGTGTTGGAAAAACTGCCATTGCTGAAGGACTGGCACAAAAAATCGTAGACGGTGAAGTACCTGAAAACTTA
GCCAAGAAACGGTTGATGGCATTGGACATGGGGTCACTGGTTGCAGGAACAAAATATCGTGGAGAATTTGAAGACCGATT
AAAAAAAATCATTGAAGAAATTTATAATGATGGCGAGGTTATTCTATTTATCGATGAGTTGCATACATTGATTGGTGCAG
GTGGCGCCGAAGGCGCCATTGATGCATCGAATATTTTAAAGCCAGCATTAGCACGTGGTGAATTGCAAACTTTGGGTGCT
ACGACATTTGATGAGTATCAAAAATATGTCGAATCCGATGCAGCTTTAGAGCGCCGCTTTGCATCAGTAACAGTTGATGA
ACCAACTCAAGATGATGCTATTGCTATTTTGAAAGGAATTCGTTCTCATTTTGAGAAGCATCATCAAGTTCAGATTGATG
ATGCAGCTATTGAAGCGGCTGTGAAACTTTCGGCTCGCTATATTTCGGATAGATTTTTGCCCGATAAAGCCATTGATTTG
ATGGATGAAGCTGGAGCAAAATTACGTATTGATGCCACTGGGAAAGCAACACCAATATCGAAAGCCAAGGTTCGTTTTGC
AGAAGTTCAAGCGGAAAAGGAAGCTGCTATTACGTCATTGGACTTTGAAAAGGCAGCCCAGTTGCGCACTGAAGAGATGA
AATTGAAGCAGAAACTGGCAAAGTCAGAAGCTAAAGATACTCAAAATAACCAAAAAGAAAATGCTGAACGATATTCGCTT
CATGTTACAGAAGAAGATATTGCTGAGGTTATTTCGCAACAAACCGGTGTGCCTGTTATGCAAATGGAAAAGAACGAGCA
ACAACGTTTGGTCAATTTGGAGTCAGTTCTGGGGCGCCGTGTTATTGGACAAAAGACAGCTATATCCGCAGTAGCTAGAG
CAATTCGTCGTGCTCGTTCTGGATTAAAAGACCCTAGTCGCCCGATTGGTACATTTATGTTTTTGGGACCAACTGGTGTT
GGAAAAACAGAACTAGCTAAAGCGTTAGCTGAAGCAATATTTGGCAGCGAAGATAACTTGATTCGAATTGACATGTCAGA
GTATCAGGAGCGTTGGTCATCTAGTCGTTTGATTGGTTCGGCACCCGGATATGTTGGTTACGACGAAGGTGGCCAATTAA
CGGAGCAGGTTCGTAATCATCCCTATTCTGTTGTCCTATTGGATGAAGCGGAAAAAGCGCATCAAGACATCTTTAATTTA
ATGTTACAGGTGTTTGATGATGGTTATTTAACGGATTCAAAAGGACGAAAGGTTGATTTCAAAAACACAATCATCATTAT
GACTTCCAATCTTGGTGCAACACGATTGCGTGATGAAAAATCAGTTGGGTTTGGTGCAGTTGATTTGAAGGACGATCACG
AAGCAGTAGCTGCAAAAATACGTGAAACCTTAAAAGAAACATTCCGACCAGAATTTATTAACCGACTAGATGAAGCTATC
GTGTTTGAAAGTTTGACGAAGCCTGAATTGTATGAAATTGTCAAGCTAATGAGTCGTTCAGTTCTACAGCGTGTTGCTGA
GCAAGGTATCAGTGTTAAGATAACACCAGCAGCAATTGACGTAGTAGCTTCAGCGGGATTTGATCCCGAATATGGTGCGC
GTCCAATTAGACGTGCACTCCAAACTAAAGTTGAAGATGCATTAAGTGAAGAATTACTGCGAGGTAATATCACAACTGAG
GACGCGGTAACGATTGGTGCCAAAAATGGTGAAATCAGAATTAGCACAAAGCCATTAAAGAAAGATACGACAAAAGCGTA
A

Protein sequence :
MDNNYTPSAQNVLVLAQEQAKYFKHQAVGTEHLLLALAIEKEGIASKILGQFNVMDDDIREEIEHFTGYGITSRYDKNIY
LPYSPKAADILHQANEELRALAQSKVGTEHILLALLQDESILSSRILLALDVNLQDMRRAILRKLGITDVRKQMKQQEKQ
QASAGTPTLDGLARDLTQMARDNKIDPVIGRPKEVRRVIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQKIVDGEVPENL
AKKRLMALDMGSLVAGTKYRGEFEDRLKKIIEEIYNDGEVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQTLGA
TTFDEYQKYVESDAALERRFASVTVDEPTQDDAIAILKGIRSHFEKHHQVQIDDAAIEAAVKLSARYISDRFLPDKAIDL
MDEAGAKLRIDATGKATPISKAKVRFAEVQAEKEAAITSLDFEKAAQLRTEEMKLKQKLAKSEAKDTQNNQKENAERYSL
HVTEEDIAEVISQQTGVPVMQMEKNEQQRLVNLESVLGRRVIGQKTAISAVARAIRRARSGLKDPSRPIGTFMFLGPTGV
GKTELAKALAEAIFGSEDNLIRIDMSEYQERWSSSRLIGSAPGYVGYDEGGQLTEQVRNHPYSVVLLDEAEKAHQDIFNL
MLQVFDDGYLTDSKGRKVDFKNTIIIMTSNLGATRLRDEKSVGFGAVDLKDDHEAVAAKIRETLKETFRPEFINRLDEAI
VFESLTKPELYEIVKLMSRSVLQRVAEQGISVKITPAAIDVVASAGFDPEYGARPIRRALQTKVEDALSEELLRGNITTE
DAVTIGAKNGEIRISTKPLKKDTTKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-175 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MI1_00700 YP_005173568.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones VFG0079 Protein 0.0 56
MI1_00700 YP_005173568.1 ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones VFG0080 Protein 1e-138 49