Gene Information

Name : MI1_08515 (MI1_08515)
Accession : YP_005175111.1
Strain : Leuconostoc mesenteroides J18
Genome accession: NC_016805
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1779655 - 1780362 bp
Length : 708 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAGTAAAGTATTAGTTGTGGACGATGAAAAACCGATTTCTGATATTATTAAATTTAACCTAACCAAAGAAGGCTACGA
TGTAGTCACCGCTGCGGATGGGCAAGAAGCATTAGATATGTATAATGATGAAAATCCTGATTTGGTTTTACTAGATCAGA
TGTTACCAGAAGTAGATGGTATTGAGGTTTTGCGTCAAATCCGTTCTAAGTCAGATGTGCCTGTCATCATGGTGACCGCT
AAGGATAGTGAGATTGATAAGGTTCTTGGTTTAGAAATGGGAGCCGATGATTATGTAACTAAACCATTTTCTAATCGTGA
ATTGGTTGCACGAGTTAAGGCTAATTTGCGAAGTCGAAAGTCTGTTTCGCAAACTTCTGAAGAGACTTTTAATAGTACAG
AAGATATTCACTTAGGTGATTTAGTAATCCATCCCCAAGCCTATATGGTTTCAAAGGATGGTGCTGATATTGAGTTAACG
CATCGTGAATTTGAATTATTATATTATTTAGCACAACATATTGGACAGGTGATGACACGTGAACACTTGTTACAGCAAGT
TTGGGGCTATGATTATTTTGGTGACGTACGTACAGTAGATGTTACGGTTCGACGATTACGTGAGAAAATTGAAGACAATC
CTAGCCATCCTAATTGGCTAGCAACACGCCGTGGCGTCGGATATTATTTACGCCCATCAGAAGAATAA

Protein sequence : 
MSKVLVVDDEKPISDIIKFNLTKEGYDVVTAADGQEALDMYNDENPDLVLLDQMLPEVDGIEVLRQIRSKSDVPVIMVTA
KDSEIDKVLGLEMGADDYVTKPFSNRELVARVKANLRSRKSVSQTSEETFNSTEDIHLGDLVIHPQAYMVSKDGADIELT
HREFELLYYLAQHIGQVMTREHLLQQVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPNWLATRRGVGYYLRPSEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 7e-33 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_012469.1.7685629. Protein 1e-68 66
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_009782.5559369.p0 Protein 7e-49 52
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_002951.3237708.p0 Protein 7e-49 52
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_003923.1003749.p0 Protein 7e-49 52
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_002758.1121668.p0 Protein 7e-49 52
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_009641.5332272.p0 Protein 7e-49 52
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_013450.8614421.p0 Protein 7e-49 52
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_007793.3914279.p0 Protein 7e-49 52
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_002952.2859905.p0 Protein 9e-49 52
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_007622.3794472.p0 Protein 4e-49 52
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_002745.1124361.p0 Protein 7e-49 52
MI1_08515 YP_005175111.1 DNA-binding response regulator HE999704.1.gene2815. Protein 5e-48 50
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_012469.1.7686381. Protein 3e-41 47
MI1_08515 YP_005175111.1 DNA-binding response regulator CP001918.1.gene5135. Protein 7e-29 46
MI1_08515 YP_005175111.1 DNA-binding response regulator AE016830.1.gene1681. Protein 4e-42 45
MI1_08515 YP_005175111.1 DNA-binding response regulator CP004022.1.gene3215. Protein 2e-38 44
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_002695.1.915041.p Protein 6e-34 44
MI1_08515 YP_005175111.1 DNA-binding response regulator CP000034.1.gene3834. Protein 6e-34 44
MI1_08515 YP_005175111.1 DNA-binding response regulator CP001138.1.gene4273. Protein 6e-33 43
MI1_08515 YP_005175111.1 DNA-binding response regulator BAC0533 Protein 5e-33 43
MI1_08515 YP_005175111.1 DNA-binding response regulator CP000647.1.gene4257. Protein 5e-33 43
MI1_08515 YP_005175111.1 DNA-binding response regulator AF155139.2.orf0.gene Protein 2e-37 43
MI1_08515 YP_005175111.1 DNA-binding response regulator FJ349556.1.orf0.gene Protein 1e-38 43
MI1_08515 YP_005175111.1 DNA-binding response regulator AE000516.2.gene3505. Protein 1e-34 43
MI1_08515 YP_005175111.1 DNA-binding response regulator HE999704.1.gene1528. Protein 6e-32 41
MI1_08515 YP_005175111.1 DNA-binding response regulator AM180355.1.gene1830. Protein 1e-35 41
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 6e-35 41
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 6e-35 41
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 6e-35 41
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 6e-35 41
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 6e-35 41
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 6e-35 41
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 6e-35 41
MI1_08515 YP_005175111.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 6e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MI1_08515 YP_005175111.1 DNA-binding response regulator VFG1389 Protein 4e-32 45
MI1_08515 YP_005175111.1 DNA-binding response regulator VFG1702 Protein 3e-33 42
MI1_08515 YP_005175111.1 DNA-binding response regulator VFG1563 Protein 2e-33 41
MI1_08515 YP_005175111.1 DNA-binding response regulator VFG1386 Protein 7e-31 41