Gene Information

Name : MI1_06800 (MI1_06800)
Accession : YP_005174768.1
Strain : Leuconostoc mesenteroides J18
Genome accession: NC_016805
Putative virulence/resistance : Unknown
Product : type I site-specific deoxyribonuclease, HsdR subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1415055 - 1417916 bp
Length : 2862 bp
Strand : -
Note : COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

DNA sequence :
ATGGTACAGACAGAATCAAAGCTTGAGAATCAGTTGATTGCACAACTCGGGAAATCTAGTTGGCAGTTTCGACCAGAATT
AAATCATTATAGTTTGATTGTTAATCATTTTCGTGTGCTTTTAAATCGACGGAATATTGACAAACTTGATGGTACACTAC
TGACTGATCAAGAATTTCAACGATTTTTAAATGAAATTTTGGGATCTAAATCAATCTATCAGTTGGGACGCTATTTACGT
GGCGATGATCAATTTCAAGGTGGAAGAGCACAAATACAGCGTGACGATGGATCAGACATAACGCTGTCGTTTTTCGATCC
TCGTGATGCAGAAAATAATATTTATGAAGTTGCTCATCAAGTTGTTGTGAATGACAAATATGAAAATCGCTATGATGTCA
CATTGCTAATTAATGGTTTACCACTGGTTCAAATTGAGTTGAAACGTCACAGTGTTGAAATGTCGCAAGCATTTCAACAA
ATATTGCGGTATCGTCGTGAGTCATTTAATGTTGGTGGTAGTTTATTTCGATATTTACAGATTTTTGTGATCAGCAATGG
CATGTCATCACGTTATTTTTCTAATAATGATGGTGAGTTAAATAAAAATTTTATTTTCAATTGGTCTGATGAAAATAACA
GGTGGATTGATGAAATTGAACCTTTTACTGCCAGTTTTCTATCTCCTCTGAATATCCATGAAATGATTTCAAAATACACA
ATTTTTGATGCGGACCAAAAAGTAATGAAAATTATGCGCCCATATCAGGTGTATGCGCAAAAATCCATCATGAGTCAGGC
TGAAATACATCCCGCTACAAACGGGTATGTTTGGCATACAACCGGTTCTGGCAAGACAATCACAGCTTTTAAAGCCGCAT
CTCAGTTGGCACTTCATACAGACGCACAGAAAATTATTTTTCTTGTTGATAGACGTGATTTGGATTCGCAGACAATTAAT
AATTTTAATGCCTATCTACCAAAGCGTGCGGATGGGCAATCGTCAATTGATCGTACAGATAATACGTCCGTTTTAGTCGA
GCAACTTAAAAACTCAACGGATACGTTGATTGTGACAACCATTCAAAAGCTTGCCAATGCTGTAAAAAATGAACGCTATC
GGTCAGTGTTAGAGCCATACAAAGAACAACGTGTGATTTTTATTGAAGATGAGGCACACCGAACCCAATTCGGTGAAATG
CGTAAACAGGTCAATAGCTGGTTTAAAAATGCACAACATTTTGGTTTCACCGGGACACCTATATTTAAAGAAAACATAGG
CGCAGATGGACGCACAACTGACGATATTTATGATACCCGTTTGCATACTTATTTGATAAAAGACGCTGTACGCGACCATA
ATGTATTACCGTTCAATGTCACCTACATCAATACTATTCATAGCAAAGAAGATATTGAAAATTTAAACGGAGAAGTTGAA
GCGCTCAATATTAAAGAAGTGTATGAGAATGAAAAACGCCTAAATCAAATTGCACAACATATTATCCTCAATCATAGTAG
CAAAACGTATAATCGCCAATATAACGCTATTTTTGCTGTTTCAGATACGCGAACAGCTTTAAAGTATTACGATATTTTTA
AAGAAATAAACAATGATTTGAAAGTAACGACGATTTTCACATGGACAGCTAACGAAGATGATAATGACGAGCACCAAAAG
GACGACACATTAACTTCCCGTCATGGCTTGGAAAAAGTCATTGATGATTATAACGACAAATATCACCAAAACTTCAGTAC
AGATACATTTTCTGATTTCTTCAACGACGTATCTAAACGTATGAAGAATCATGACGCCAAATCACCTGAAAATAATATTG
ATGTTTTGATAGTTGTCAACATGTTCTTAACAGGTTTTGATGCGCCGACACTGAATACGTTATATGTTGATAAAAACTTG
CAATACCACGGACTTATTCAAGCTTTTTCACGAACCAATCGTGTTCAAAAAGCGCCAAAAGATTACGGCAATATTGTGGC
ATACCGTAATATCAAAAGTAAAACAGATGAAGCGGTCCAGCTTTTCTCGCAAGGCGACAAAGCAGCGTTTTTCGCACCGA
GTTATGAAAACTTAAAACTAGATTTTCAACAAGCAATAAGCGCCTTGAGGGACAAGGTAGCTACACCTGAAGACACAAAT
CGGTTATTAGATGAGGGTGAAACAGCGGAACTTGAATTTATCAAACTATTCAGAAATGTCATGTCACTGCAAAGTCGTAT
CAGCGTTTACGAAGAATTTGATTGGTCGGAAATTGAAACAGAGCTCGACTGGACGCAACAAATATTTGATGATTTCAAAG
GCAAGTATGCAACATTCTATGAACGGCACAAGGCACGACAAAAAGAAAAAGCATCAATCATCGATGATGTAGATTTTTAC
CCCGAGCTCCTGATGGTTGATGCAATTGATGTTGATTATATCAATCGCCTTATTTCACAAATCGACTTATCGTCACCTAA
TGCACGGACTGAAGGTGTAGAAAAAGTAAAAAAAGCCCTTACTAACAATACCGAACCAACGCTGTTTTCTAAGCGTGAAT
TGTTAGAACAGTTCTTGGATTCCGTCATTCCGGAGTTGAATCACGATGCGAATATTACAGGCGAACTTAATCATTTCTTG
GCGGATAAACGTCAAGCTGAAATTTATCATTTTGCAGAAGAACATCGTTTAGAGCCATCCCAGTTAGCAGAACAAGTCGC
TGAATATGAAGTGAGTCAACATGAAAATTCTAAAGCACTTAGTGAACTGACTGCGGGCATGACATTCAAAGAAAAAAGAA
CAGCAAAACAATCTATTAAAAACTTCATCATTGAAACTGCTAAAAAGTTTGTGATGAATTAG

Protein sequence :
MVQTESKLENQLIAQLGKSSWQFRPELNHYSLIVNHFRVLLNRRNIDKLDGTLLTDQEFQRFLNEILGSKSIYQLGRYLR
GDDQFQGGRAQIQRDDGSDITLSFFDPRDAENNIYEVAHQVVVNDKYENRYDVTLLINGLPLVQIELKRHSVEMSQAFQQ
ILRYRRESFNVGGSLFRYLQIFVISNGMSSRYFSNNDGELNKNFIFNWSDENNRWIDEIEPFTASFLSPLNIHEMISKYT
IFDADQKVMKIMRPYQVYAQKSIMSQAEIHPATNGYVWHTTGSGKTITAFKAASQLALHTDAQKIIFLVDRRDLDSQTIN
NFNAYLPKRADGQSSIDRTDNTSVLVEQLKNSTDTLIVTTIQKLANAVKNERYRSVLEPYKEQRVIFIEDEAHRTQFGEM
RKQVNSWFKNAQHFGFTGTPIFKENIGADGRTTDDIYDTRLHTYLIKDAVRDHNVLPFNVTYINTIHSKEDIENLNGEVE
ALNIKEVYENEKRLNQIAQHIILNHSSKTYNRQYNAIFAVSDTRTALKYYDIFKEINNDLKVTTIFTWTANEDDNDEHQK
DDTLTSRHGLEKVIDDYNDKYHQNFSTDTFSDFFNDVSKRMKNHDAKSPENNIDVLIVVNMFLTGFDAPTLNTLYVDKNL
QYHGLIQAFSRTNRVQKAPKDYGNIVAYRNIKSKTDEAVQLFSQGDKAAFFAPSYENLKLDFQQAISALRDKVATPEDTN
RLLDEGETAELEFIKLFRNVMSLQSRISVYEEFDWSEIETELDWTQQIFDDFKGKYATFYERHKARQKEKASIIDDVDFY
PELLMVDAIDVDYINRLISQIDLSSPNARTEGVEKVKKALTNNTEPTLFSKRELLEQFLDSVIPELNHDANITGELNHFL
ADKRQAEIYHFAEEHRLEPSQLAEQVAEYEVSQHENSKALSELTAGMTFKEKRTAKQSIKNFIIETAKKFVMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0054 YP_300144.1 type I site-specific restriction-modification system restriction subunit Not tested SCC15305cap Protein 0.0 44