Gene Information

Name : DND132_0863 (DND132_0863)
Accession : YP_005166882.1
Strain : Desulfovibrio desulfuricans ND132
Genome accession: NC_016803
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 924684 - 925988 bp
Length : 1305 bp
Strand : -
Note : KEGG: cpf:CPF_0670 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAGCTATACCACGCAAATGGACGCGGCCCGCAAGGGCATCGTCACCCCCCAGATGGAGACCGTTGCCCGTAAGGAAAA
CATCCGCATCGAGGACCTCATGGAGCGGATGGCCAGAGGTTCGGTCATCATCCCGGCCAACAAGAACCACAAGAACCTGG
ACGCCGAGGCCGTGGGCGAGGGCATGCGCATCAAGATCAACGTCAACCTCGGCATCTCCAAGGACTGCTGCGACGTCGAG
CCCGAGCTGGAAAAGGTCCGGGCCGCCCTGGACATGAAGGCCGAGGCCATCATGGACCTGTCCTGCTACGGCAAGACTCA
GGAATTCCGGCAGAAACTGGTGGAGATGTCCCCGGCCATGATCGGCACGGTGCCCATCTACGACGCCGTGGGCTTCTACG
ACAAGAACCTTCAGGACATCACCGTGGACGAGTTCTTCAAGGTGGTCGAGCGCCACGTCATGGACGGCGTGGACTTCCTG
ACCATCCACGCGGGCCTGAACAAGCACACCGCCGAGAAGGTCAAGAGCGCGAAACGGCTGACCAACATCGTCTCGCGCGG
CGGCTCCCTGCTGTTCACCTGGATGGAGATCAACAAGGCCGAGAACCCGTTCTACGAGCACTTCGACCGGCTGCTGGACA
TCTGCGAAGAATATGACGTGACCCTGAGCCTGGGCGACGGTTGCCGTCCCGGCTGCCTGTACGACGCCACCGACGCCTCC
CAGGTGGAGGAGCTGATCACCCTGGGCGAGCTGACCAAGCGCGCCTGGGAGCGCAACGTCCAGGTCATGATCGAGGGCCC
CGGCCACATGGCCATGAACGAGATTCCCGGCAACATGATGATCGAGAAACGGCTGTGCCACAACGCGCCGTTCTACGTCC
TCGGCCCCCTGGTCACGGACGTGGCGCCGGGCTACGACCACATCACCGCGGCCATCGGCGGGGCCATCGCGGGCGCGTCC
GGCGCGGACTTTCTGTGCTACGTCACCCCGGCCGAACACCTGCGCCTGCCCACCCTCGAGGACATGAAGGAGGGCATCGT
GGCCACCCGCATCGCGGCCCACGCCGCCGACATCGCCAAGGGCTATCCCGGCGCCGTGGAGTGGGACAACAACATGGCCC
GGGCCCGCGCGGCCCTGGACTGGGACGCCCAGTTCGCCCTGGCCATGGACCCGGTCAAGCCCGTGGAATACCGCAAGTCC
TCGGAGCCCGAGCACAAGGACTCCTGCACCATGTGCGGCAAGATGTGCGCGGTGCGCAACATGAACCGCGTGCTTGAGGG
CAAGGACATCCAGCTGGACGACTAG

Protein sequence :
MSYTTQMDAARKGIVTPQMETVARKENIRIEDLMERMARGSVIIPANKNHKNLDAEAVGEGMRIKINVNLGISKDCCDVE
PELEKVRAALDMKAEAIMDLSCYGKTQEFRQKLVEMSPAMIGTVPIYDAVGFYDKNLQDITVDEFFKVVERHVMDGVDFL
TIHAGLNKHTAEKVKSAKRLTNIVSRGGSLLFTWMEINKAENPFYEHFDRLLDICEEYDVTLSLGDGCRPGCLYDATDAS
QVEELITLGELTKRAWERNVQVMIEGPGHMAMNEIPGNMMIEKRLCHNAPFYVLGPLVTDVAPGYDHITAAIGGAIAGAS
GADFLCYVTPAEHLRLPTLEDMKEGIVATRIAAHAADIAKGYPGAVEWDNNMARARAALDWDAQFALAMDPVKPVEYRKS
SEPEHKDSCTMCGKMCAVRNMNRVLEGKDIQLDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 8e-65 45
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 8e-65 45
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 8e-66 44