Gene Information

Name : DND132_0630 (DND132_0630)
Accession : YP_005166650.1
Strain : Desulfovibrio desulfuricans ND132
Genome accession: NC_016803
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 683410 - 684918 bp
Length : 1509 bp
Strand : -
Note : KEGG: dsa:Desal_2527 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type

DNA sequence :
ATGCTCCAGGCCCTCGAGGCCAAGGACGAACTCAATTCCGTCATCAAGACACGCGTGGAAAAGGCGTGTCTCCTCCTGGA
CAACAACATCCCCCTGTACCCCAACAATTTCCGGCGCGATGCGGAAATCCAGGACATCTGGCGGGAGTACGGGGAGTTGG
ACGAAGAGGCCCTGGAGGGGACCGACGCGCAGTTCACCATCGCCGGGCGGGTGGTCTCCTACCGCTCCTTCGGCAAGGTC
ACCTTCTTCCACATGCAGGACCGCAGCGGCAACATCCAGGTCTACGCGGCCCGCGACGAACTGGGCCCGGACGAGTACCA
GCTCTTCAAGAAGACGGACATCGGCGACATCGTCGGCGTGACCGGCTCCCTGTTCCGGACCAAGACCGGCGAGCTGACCG
TCAAGACAAGGCATTTCCAGCTGGTGACCAAGTCCATGCGTCCGCTGCCCGAGAAATACCACGGGCTCAAGGACGTGGAG
ACCCGCTATCGCCAGCGGTACGTGGACCTCATCGTCACCCCCCGGACCAAGGAAATCTTCCAGGCCCGCACGGCCATCAT
CCGGGAGCTGCGCAACATCCTCGACGAGAAGGGCTTCATGGAAGTGGAAACGCCCATGATGCAGGCCATCCCCGGCGGGG
CCACGGCCAAGCCCTTCGAGACCCACCACAACGCCCTGGACATGAAGCTCTACATGCGCATCGCGCCCGAGCTCTATCTC
AAGCGCCTCCTGGTGGGCGGTTTCGAGCGGGTCTACGAGATCAACCGCAACTTCCGCAACGAGGGCATGGACACCCAGCA
CAACCCCGAGTTCACCATGCTCGAGTTCTACTGGGCCTACGCCGACTTCATGGACCTCATGGACCTGACCGAGGAGATCT
TCTCGCGCATCGCCGAGAAGGTCACCGGCTCCACCGTGGTCCCGTATCAGGGCGAGATGATCGACCTGACCGTGGGCGCC
TGGACGCGCATGCCGTTCCACGAATCCCTGGAGAAGATCGGCGGCGTGTCCCCCGACGTCTACATGGACTACGACAGGTG
CGCGGCCATGGTGAAGGAGAAGGGCGAGAAGGTCATCACGGGCGAAAAGCTCGGCAAGCTTCAGGCCAAGCTCTTCGACC
TGCTGGTGGAACCCCGGCTGATCCAGCCCCATTTCATCTATCATTACCCGACCGACATCTCGCCGTTGTCCCGCCGAAAC
GAGGACAACCCCGACATAACCGACCGCTTCGAGCTGTTCATGACCGGCCGCGAGTTGGCCAACGCCTTTTCCGAACTGAA
CGATCCCGTGGACCAGCGCGGTCGTTTCGAGATCCAGGTTCAGGAGAAGGAGGCCGGTGACGAAGAGGCGCACTTCATGG
ATGAGGACTACGTCCGCGCCCTGGAATACGGCATGCCCCCGGCTGCCGGCCAGGGCATCGGCATCGACCGCCTGGTCATG
CTGCTCACGGACTCCGCCTCCATCCGCGAGGTCATCCTCTTCCCGCTGCTCAGGCCCGAGGCCGGGTAG

Protein sequence :
MLQALEAKDELNSVIKTRVEKACLLLDNNIPLYPNNFRRDAEIQDIWREYGELDEEALEGTDAQFTIAGRVVSYRSFGKV
TFFHMQDRSGNIQVYAARDELGPDEYQLFKKTDIGDIVGVTGSLFRTKTGELTVKTRHFQLVTKSMRPLPEKYHGLKDVE
TRYRQRYVDLIVTPRTKEIFQARTAIIRELRNILDEKGFMEVETPMMQAIPGGATAKPFETHHNALDMKLYMRIAPELYL
KRLLVGGFERVYEINRNFRNEGMDTQHNPEFTMLEFYWAYADFMDLMDLTEEIFSRIAEKVTGSTVVPYQGEMIDLTVGA
WTRMPFHESLEKIGGVSPDVYMDYDRCAAMVKEKGEKVITGEKLGKLQAKLFDLLVEPRLIQPHFIYHYPTDISPLSRRN
EDNPDITDRFELFMTGRELANAFSELNDPVDQRGRFEIQVQEKEAGDEEAHFMDEDYVRALEYGMPPAAGQGIGIDRLVM
LLTDSASIREVILFPLLRPEAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-117 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DND132_0630 YP_005166650.1 lysyl-tRNA synthetase VFG1668 Protein 1e-117 53