Gene Information

Name : DND132_0461 (DND132_0461)
Accession : YP_005166482.1
Strain : Desulfovibrio desulfuricans ND132
Genome accession: NC_016803
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 508082 - 509005 bp
Length : 924 bp
Strand : +
Note : KEGG: dsa:Desal_1953 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein

DNA sequence :
ATGGCGCGCCCCGACAAAGAGAAAAACATCAACGAGTACAGCCACCCCTGGGTGGACAGATACCTTGAGCACCTGCTGAT
CGAAAAGGGGCTGTCCGAGAACAGCCTGACCGGCTACGCCAACGACCTGGGCTCCCTGCTCGCCTTCCTGGAGGAGCGCT
CCTTTCCGCTCAAGGACCTGACGGACCAGACCCTGTTCCTCTACCTGACCCATCTGCGGGCGCGCGGCCTGAAGAGCCGC
TCCCTGGCCCGGCACCTCTCCTCCCTGCGCGGGTTCTTCGCCTTCGCCGTGGGCGAGAAGTGGTACAAGGAGGACCCCGG
TCAGCTCCTCGAAAATCCCAAGCTGCCGCGCAAGCTGCCGGAATTTTTAAGCCGCGAGGAGATTTCCCGGGTCCTGGCCC
TGCCCGACACCTCCACCCCGCTGGGCATGCGCGACAAGGTCATGCTGGAACTGCTCTACGCGGCGGGGCTCCGGGTGTCC
GAGCTCATCGGCATGAAGGTCCTGGACTATGACCCCCAGGTGGGCATGCTCAAGGTCTTCGGCAAGGGGTCCAAGGACCG
GCTCATCCCCATCCACTACACGGCCCAGGACTACCTCAACCGCTACTTGGAATTCACCCGGCCCGGCTTCAAGCCACGTG
AGGACTTCATGTTCCTGAACCGCTCGGGCAAGGGGCTGACCCGCCAGGGCGTGTGGAAGCTGATCAAGAAATACGCCGAG
GCGGCGGGCATAAAGCGGTCCATCTCGCCGCACACCTTCCGCCACTCCTTCGCCACCCACCTGCTGGAAGGGGGCGCGGA
CCTGCGCACCGTGCAGATTCTCCTGGGGCACGCGGACATCAGCGCCACCGAGATCTACACCCACGTGGAGGCCAACCGGC
TCAAGACCCTGCACCGGAAGTTCCACCCGCGATCAACCATGTGA

Protein sequence :
MARPDKEKNINEYSHPWVDRYLEHLLIEKGLSENSLTGYANDLGSLLAFLEERSFPLKDLTDQTLFLYLTHLRARGLKSR
SLARHLSSLRGFFAFAVGEKWYKEDPGQLLENPKLPRKLPEFLSREEISRVLALPDTSTPLGMRDKVMLELLYAAGLRVS
ELIGMKVLDYDPQVGMLKVFGKGSKDRLIPIHYTAQDYLNRYLEFTRPGFKPREDFMFLNRSGKGLTRQGVWKLIKKYAE
AAGIKRSISPHTFRHSFATHLLEGGADLRTVQILLGHADISATEIYTHVEANRLKTLHRKFHPRSTM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-44 46
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-44 46