Gene Information

Name : DND132_0036 (DND132_0036)
Accession : YP_005166058.1
Strain : Desulfovibrio desulfuricans ND132
Genome accession: NC_016803
Putative virulence/resistance : Virulence
Product : sigma-54 factor interaction domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 36723 - 37739 bp
Length : 1017 bp
Strand : +
Note : KEGG: dsa:Desal_2984 sigma54 specific transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase

DNA sequence : 
ATGTCGCTCAATCTGGACGGCATCATCGGGAACAGTCCGGCCCTGGCCAGGGTGTTCAAGGTCTTGGGCAAGGTCGCGCC
CACGGACAGCACGGTGCTGGTCACGGGCGAGTCGGGGACCGGCAAGGAATTGCTGGTCCGGGCGCTGCATCGCAACAGCG
AGCGCCGCGACATGCCGTTCGTGCCCATCAACTGCGGGGCCATCCCCAGGGAACTGCTCGAATCCGAGCTGTTCGGGCAC
GAGAAGGGCGCATTCACCCACGCCATCCGTTCCCGGCCGGGCCGGTTCGAGCTGGCCGACGGCGGGACCATTTTCCTGGA
CGAGATCGGGGACATGGATTTGTCGCTCCAGGTCAAGATCCTGCGCGCCCTCCAGGAAAAGGAGATCGAGCGCGTGGGCG
GCACGTCCATCAAGAAGGTGGACGTCCGGGTGGTGGCGGCCACCAACCGGGACCTGGAGGGCGAGGTGTCCTCGGGCCGG
TTCCGCGAGGACCTGTTCTACCGCCTCAACGTCATCCCCCTGAAATTGCCGCCCCTGCGCAGCCGGGGCATGGACATCCT
GCTCCTGGCCGAGCACTTCCTGAACCGGCACTGCGGCAGCAAGGCGCGCAAGGCGCTGACCCTGTCAGACAAGGCGCGGG
AGATGCTCCTGACCTATTCCTGGCCCGGCAACGTGCGCGAGCTGGAGAATTTCATGGAGCGGCTGACCATCCTGTGCGAC
GGCTGCGAGGTGGAGCCCGAGGACCTGCCGGAGAAGATCTTCACGGACATCGGGGAAAAGCCGCTCCGGCGCGAAGAGAA
GATTGTGCCCATGCAACCGGTCGGGTTCGCCTGGCCCTCGCTCAAGGACATGCGCGACAAGGACATGAAGCTCAAGGATT
TCCTGGAGGCCATCGAGGGCCGCCTGCTGAGCGAGGCCCTGGACCAGGCCGAGGGGGTCAAGAACAAGGCCGCCGAGCTG
GTCGGCATCAAGCGGACGACCCTCATCGAGAAGCTGAAAAAAAGGGATCTGTTGTAA

Protein sequence : 
MSLNLDGIIGNSPALARVFKVLGKVAPTDSTVLVTGESGTGKELLVRALHRNSERRDMPFVPINCGAIPRELLESELFGH
EKGAFTHAIRSRPGRFELADGGTIFLDEIGDMDLSLQVKILRALQEKEIERVGGTSIKKVDVRVVAATNRDLEGEVSSGR
FREDLFYRLNVIPLKLPPLRSRGMDILLLAEHFLNRHCGSKARKALTLSDKAREMLLTYSWPGNVRELENFMERLTILCD
GCEVEPEDLPEKIFTDIGEKPLRREEKIVPMQPVGFAWPSLKDMRDKDMKLKDFLEAIEGRLLSEALDQAEGVKNKAAEL
VGIKRTTLIEKLKKRDLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpS AAD24684.1 sigma-54-dependent enhancer-binding protein HrpS Virulence Hrp PAI Protein 1e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DND132_0036 YP_005166058.1 sigma-54 factor interaction domain-containing protein BAC0467 Protein 2e-63 46