Gene Information

Name : DND132_3153 (DND132_3153)
Accession : YP_005169159.1
Strain : Desulfovibrio desulfuricans ND132
Genome accession: NC_016803
Putative virulence/resistance : Unknown
Product : type I restriction-modification system, M subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3528606 - 3530228 bp
Length : 1623 bp
Strand : -
Note : KEGG: eba:ebA2607 type I site-specific deoxyribonuclease, methylase subunit; TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase

DNA sequence :
ATGACTGAAAGCAACCAGAAACGACTCGGCCAAATACTCTGGGACATCGCCGACCAGCTGCGCGGCGCGATGAACGCGGA
CGATTTCCGTGATTACATGCTCGCATTCCTGTTCCTGCGCTATCTCTCAGACAATTACGAGCAAGCGGCAAAGAAGGAGT
TAGGGAAGGATTATCCCGACCCGAATGCGGTGGATAACGGAGGCCGCACCCCCCTGTCGGTGTGGTACGACAATAATCCC
GGCGATATAGCCGCATTTGAAAAACAGATGCGCCGCAAGGCCCATTACGTCATCAAGCCGGACCACTTGTGGACGAATAT
CGCCTACATGGCCAAGACACAGAACGATGAACTGCTGAACACATTGCAGGAAGGTTTCAAGTACATCGAGAACGAGTCGT
TCGAAAGCACCTTCTCCGGGCTGTTTTCCGAAATCAACCTCGGCTCGGAGAAACTGGGTAAGACCTATCAGAACCGCAAT
GACAAACTTTGCACGATCATCACCAAAATCGCCGATGGACTTGCGGATTTTACGACCGATTCCGACACGCTGGGCGATGC
CTACGAGTACTTAATCGGCCAGTTCGCCGCAGGGTCAGGCAAAAAGGCGGGGGAATTTTATACGCCCCAGCGTATCAGCG
ACATATTGTCCGCCATCGTCACTCTCGACGGCCAAGATCCCAAGACTGGCCCCCGAAAAAAGCTGGCAAGCGTGATGGAT
TTTGCCTGCGGGTCGGGGTCGCTGTTGCTGAACGTCCGTCACAAAATGGTCAATGCCGGTGGCAGCGTCGGTATGATCTA
CGGACAGGAAAAAAACATCACGACCTACAACCTTTGCCGCATGAACATGCTGCTGCACGGGGTGAAGGATTCCGAATTCG
AGATTTTTCACGGCGACACGTTGACCAACGACTGGGACAAGCTCCGCGAACAAAACCCCGCAAAGAAGCCGACGTTCGAT
GCGGTAGTAGCCAATCCCCCATTCAGCTACCGCTGGGAACCGAATGAGGCTCTCGGTGAAGATATGCGGTTCAAGAACTA
CGGGCTGGCACCTAAGAGCGCAGCCGACTTCGCCTTTCTCCTGCATGGGTTTCACTACCTCAAGGATGAAGGCGTGATGG
CGATCATCCTGCCACACGGCGTCCTGTTTCGTGGAGGCAAAGAGGCCGCGATTCGTCGGAAACTGCTCGAAGACGGACAC
ATCGATACGGTTATTGGACTACCGGCGAACCTGTTCTACTCGACGGGTATTCCCGTGTGTATCCTCGTACTCAAAAAATG
CAAGAAACCCGATGATGTCCTGATCATAAACGCTGCCGAGCATTTCGAAAAAGGAAAGCGGCAAAACTATCTGAACGCCG
AGCACATCGACAAGATCATCGATACCTACCAGCAGCGGCCAGAGAAGATTGAACGGTACGCCCGGAGCGTTGGGCTGAAA
GAAATCAGAGACAACGACTATAACCTGAATATCTCGCGCTATGTCAGCACGGCCGAGCAGGAACCAGAGATCGACCTGAA
GGCGACCCACGACAAACTCGTCGAGGCGGAGAAGGCGGCCAAGGCGGCCAAGGAAAAACACAACGGGTTTCTTAAGGAAC
TGGGCCTGCCGCTTTTACCGTAA

Protein sequence :
MTESNQKRLGQILWDIADQLRGAMNADDFRDYMLAFLFLRYLSDNYEQAAKKELGKDYPDPNAVDNGGRTPLSVWYDNNP
GDIAAFEKQMRRKAHYVIKPDHLWTNIAYMAKTQNDELLNTLQEGFKYIENESFESTFSGLFSEINLGSEKLGKTYQNRN
DKLCTIITKIADGLADFTTDSDTLGDAYEYLIGQFAAGSGKKAGEFYTPQRISDILSAIVTLDGQDPKTGPRKKLASVMD
FACGSGSLLLNVRHKMVNAGGSVGMIYGQEKNITTYNLCRMNMLLHGVKDSEFEIFHGDTLTNDWDKLREQNPAKKPTFD
AVVANPPFSYRWEPNEALGEDMRFKNYGLAPKSAADFAFLLHGFHYLKDEGVMAIILPHGVLFRGGKEAAIRRKLLEDGH
IDTVIGLPANLFYSTGIPVCILVLKKCKKPDDVLIINAAEHFEKGKRQNYLNAEHIDKIIDTYQQRPEKIERYARSVGLK
EIRDNDYNLNISRYVSTAEQEPEIDLKATHDKLVEAEKAAKAAKEKHNGFLKELGLPLLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 6e-96 44
ORF6 BAC22943.1 - Not tested etd PI Protein 1e-95 44
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 1e-95 44
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 2e-95 44
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 9e-96 44
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 2e-95 44
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 1e-95 44
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 8e-96 44
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 1e-95 44
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 6e-96 44
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 1e-95 44
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 6e-96 44
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 1e-95 44
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 2e-95 44
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 3e-94 44
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 1e-95 44
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 1e-95 44
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 9e-96 44
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 3e-96 43
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 2e-95 43
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 2e-95 43
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 1e-94 43