Gene Information

Name : DND132_3117 (DND132_3117)
Accession : YP_005169123.1
Strain : Desulfovibrio desulfuricans ND132
Genome accession: NC_016803
Putative virulence/resistance : Virulence
Product : molybdopterin dinucleotide-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3480828 - 3483905 bp
Length : 3078 bp
Strand : +
Note : PFAM: molybdopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: pmr:PMI1681 tetrathionate reductase subunit A

DNA sequence :
ATGGATAAGAACAGACGCGAACTGGTCAAGAACACCCTGGCCGTGGCCGGGCTGGGCATGCTCGGCGCGGGCGCGCTCCT
CAAGCCGGGCCGCGCCGAGGCCGCGCAGGCGGCCATGCCCGAGGACCCGGCCAGGGTCTCGCCCGAGTCCCTGGCCCCGG
AATACGAACGCACCCCGGAGGGCGTCCGGCTGGGCGAAGGGCAGCACATGGCCTTCAACCAGTGCTGGGGCTGCACCACC
TTCTGCGGCGTGCGCCTGCACATCGACGACGCCACGGACGACGTGGTCCGGGTGGCGGGCAACCCGTACAACCCCCTGTC
CCATGAAAAGCACTTCCCCATGTCCATGCCCGTGGGCGAGGCCCTGGATCGCCTGTCCGCCGACAAGGACATGGGCCACG
CCCAGCGGTCCGCGGTCTGCGGGCGCGGGGCGGCCATGTTCGAGACCGCGCACAGCCCCTTCCGCATCACCCGCTGCCTC
AAGCGCGCAGGCAAGCGCGGCGAGAACAGGTGGACGCACATCTCCTTTGAACAACTGCTCGAAGAGGTCGTCGAGGGCGG
CGACCTGTTCGGCGAGGGCCACGTGGACGGCCTGCGGGCCATCCGCGACCTGAAAACCCCGGCCAACCCCGGTCACCCGG
AGTTCGGGCCGGTGAGCAACCAGCTGCTCCTGACCTACGCCGTGGACGACGGGCGCAGCGACTTCTTCTTCCGCCGCTTC
GGCATGAACGCCTTCGGGACCAAGAACTTCGGCAAGCACGGGGCGTACTGCGGCCTGTCCTTCCGCATCGGCTCGGGCAT
GTTCATGGACGACCTAACCAAGAACGCGCACATCAAGCCGGACTGGGCCAACTGCGAGTTCGCCCTGTTCTGGGGCACCG
CGCCGTCCCAGGCGGGCAACCCGTTCAACCGCTCGGCCCGCATCCTGGCCTCGGCGCGCACCGACGGGGACCTGCACTAT
GCGGTCATCGACCCGGTCCTGCGCATGCCCGCCTCGGACGCGGCCCGCGAGCGCTCCCGCTGGGTGCCCATCAACCCCGG
CATGGACTCGGCCCTGGCCATGGGCATGATCCGCTGGATCATCGAGAACGAGCGCTATGATCGGAACTTCCTGGTCCGGC
CGAACACGGCCGCCGCCGAAAAGGCGGGCGAGATCAGCATCTGCAACGCCACCTATCTGGTCGTCCGTTCGGGCGGGAGC
CGGGGCAAATTCCTGCGCGCGGCCCAACTCGGACTGGGGAGCGACGAGGCCTTCGTGGTCGTGGACGCGGCCACGGACAA
GCCCGTCTCCTTCGACGCCTGCGACGAGGGCGTCCTGGACTTCGCGGGCGAGCTGACCCTGGCCTCGGGCGAGATCGTGC
GGGTGGCCACCGCCTTCCGGCTGCTCAAGGAGCAGGCCATGGCCCACGGGCTGGACGAGATGTCCGCCCGCTGCGGCGTG
CCCGTGGAGCGGATCGTCGAGCTGGCCCGCGAGTTCACCGCCCACGGCAAAAAGGCGGCCGTGGACGTGCACGGGGGCAT
GATGTCCACCTCGGGCGCCAACGCCACCTTCACTGTCCTGACCCTGAACACGCTCATCGGCAACATCAACGCCAAGGGCG
GCATCTCGGCCACGGCGGGCAACTACCATGGCCCGGCCATGAACGGCCCCCGGTACGACCTGAACAAGTTCCCCGGCCAG
ATCCAGGCCAAGGGGTTCCCGGCCATCCGCTGCCGCGCACCGTACCAAAAGTCCACGGAATTCAAGGAAAAGAAGGCGGC
GGGACAGAACCCGTACCCGGCGCGGTACCCCTGGTACCCGTTCACCCCGCCGAACATGCCCGCCGAGCATCTGCTTTCCC
ACGTGAACGGCCACCCGTTCCGCTACAAGTGCTGGATCAACTGGACCGGCAACGTCATTTACGGCCACGGCGGCCTGCAC
CGGGCCGTGGACGAGGCCCTGAAGGACCCCGCGAGCCTGCCGCTGATCATCGGCATCGACACCTTCCACAACGAGACCAA
CGCCTATGCCGACTACCTGGTGCCCGACCCGTGCATGTTCGAGGGCTGGGGCGGGTTCTCCGGGGCGTGGTCCGGGGTGC
TGACCAAGATGTCCACGGCACGCTGGCCCGCCGTCGCGCCCAAGCAGGAGAAGACCTCGGACGGGCGTCCGGTGTGCATG
GAGCAGTTCCTCATCGAGGCGGCCAAACGCATGGGGTTGCCGGGGTTCGGCGACCAGGCCATCCCGGCGGCGGACGGCAC
GGCGGCCCCGCTGCACGGGCCCGAGGACTACTACCTGCGCCTGGCGGCCAACATCGCCTTCTTCAAGGACCAGGTCCTGC
CCGCCCCGAGCGAGGAGGACATCGCCTTGTCCGGCATCGGCCGTATCCTGCCCGACATCGAGCGGACCCTGCGCGAGGAC
GAGCGCGGTCCGGTGGCCGCCGTGTACAGCCGGGGAGGGCGGTTCGCCCCCTACGGCAAGAGCTACGACGGCGAGTGGCT
CGGCGGGCGGTGGAAGAAGACCCTCCAGATCTACAACGAGCAGGTGGGCACCGCCATCAATTCCCAGACCGGGGAGCCGT
ACCTGGGCGTGGCCACCTTCATGCCGCCCAAACTGACTGACGGCAGCGAACTGCGCGCGGTCTGGACCGAGGCGGACTAC
CCCCTGGTCATGACCTCGTTCAAGTCCAACCTGATCAACTCCTACGCCGTGGTCCTGGACCGGCTGCGGGCCATCAAGCC
CCTGAACATGGTCATGGTCAACGACCGCGACGCGGCCCGGTTCGGCCTGGCCCATGGCGACGAGGTGGAGATCACGAGTC
CCGCCGCCTCGGCCCGGGCCACGGTGGTGGTCGGCGACGTGGTCGCCCCCGGCGTGGTCGCGGTGGAGCACGGCTTCGGC
CACCGCTCCCTGGGCGCGGCCGACGTCATTGTGGACGGTCATGTCATCAAGGCCAACCCCGGCGCGGCCAACGGCTTCAG
CCTCAACGACCTGGTCCCCAACGACCCCACCCGCCGGGGCGTCTCCACCCTCCAGGAACATGAAACCGGCGCGGCCGCCC
GCCAGGGCATCCCGGTGCGCATCAAGAAAATCGGCTGA

Protein sequence :
MDKNRRELVKNTLAVAGLGMLGAGALLKPGRAEAAQAAMPEDPARVSPESLAPEYERTPEGVRLGEGQHMAFNQCWGCTT
FCGVRLHIDDATDDVVRVAGNPYNPLSHEKHFPMSMPVGEALDRLSADKDMGHAQRSAVCGRGAAMFETAHSPFRITRCL
KRAGKRGENRWTHISFEQLLEEVVEGGDLFGEGHVDGLRAIRDLKTPANPGHPEFGPVSNQLLLTYAVDDGRSDFFFRRF
GMNAFGTKNFGKHGAYCGLSFRIGSGMFMDDLTKNAHIKPDWANCEFALFWGTAPSQAGNPFNRSARILASARTDGDLHY
AVIDPVLRMPASDAARERSRWVPINPGMDSALAMGMIRWIIENERYDRNFLVRPNTAAAEKAGEISICNATYLVVRSGGS
RGKFLRAAQLGLGSDEAFVVVDAATDKPVSFDACDEGVLDFAGELTLASGEIVRVATAFRLLKEQAMAHGLDEMSARCGV
PVERIVELAREFTAHGKKAAVDVHGGMMSTSGANATFTVLTLNTLIGNINAKGGISATAGNYHGPAMNGPRYDLNKFPGQ
IQAKGFPAIRCRAPYQKSTEFKEKKAAGQNPYPARYPWYPFTPPNMPAEHLLSHVNGHPFRYKCWINWTGNVIYGHGGLH
RAVDEALKDPASLPLIIGIDTFHNETNAYADYLVPDPCMFEGWGGFSGAWSGVLTKMSTARWPAVAPKQEKTSDGRPVCM
EQFLIEAAKRMGLPGFGDQAIPAADGTAAPLHGPEDYYLRLAANIAFFKDQVLPAPSEEDIALSGIGRILPDIERTLRED
ERGPVAAVYSRGGRFAPYGKSYDGEWLGGRWKKTLQIYNEQVGTAINSQTGEPYLGVATFMPPKLTDGSELRAVWTEADY
PLVMTSFKSNLINSYAVVLDRLRAIKPLNMVMVNDRDAARFGLAHGDEVEITSPAASARATVVVGDVVAPGVVAVEHGFG
HRSLGAADVIVDGHVIKANPGAANGFSLNDLVPNDPTRRGVSTLQEHETGAAARQGIPVRIKKIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrA YP_216391.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 47
ttrA NP_456144.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 47
ttrA NP_805054.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 47
ttrA NP_460348.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 47
ttrA CAB37416.1 tetrathionate reductase subunit A (TtrA) Virulence SPI-2 Protein 0.0 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DND132_3117 YP_005169123.1 molybdopterin dinucleotide-binding protein VFG0484 Protein 0.0 47