Gene Information

Name : DND132_1885 (DND132_1885)
Accession : YP_005167894.1
Strain : Desulfovibrio desulfuricans ND132
Genome accession: NC_016803
Putative virulence/resistance : Resistance
Product : flagellar repeat-containing transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2101875 - 2102525 bp
Length : 651 bp
Strand : -
Note : KEGG: pde:Pden_0738 flagellar repeat-containing transferase

DNA sequence : 
ATGCTCGATCCCACCGCCCGCCACCCCATGGTCCTGCCCGACGGAACGGTCGTCAAGACCGTGGTCAACCTGAACCAGGT
CGTCGATCACCCGCGCATGGAGATCGGGGACTTCAGCTACTATTCCAACTTCAACCCGGTGGAGGACTACGCGGCGGCCA
TCGCCCCGTACCTCTTCCCCCTGAGCCCGGAACGACTCGTCATCGGCCGGTTCGTCCAGATCGCCCACGGCGTGGTCTTC
ATCACCAGCTCGGCCAACCACGACATGCGCGGCTTCTCCACCTACCCCTTCTGGAACTTCACCATGACCCCGGAGACCGG
CTTCGACGAGGTTAAGGCCCTGTTCAACCTGCCCGGCCGCAAGGGCGACACCGTCATCGGCAACGACGTCTGGCTCGGCA
TGGAGGCCGTGGTCATGCCCGGCGTGACCATCGGCGACGGCGCGATCATCGGGGCCCGGTCCGTGGTCGGGTGCGACGTG
CCCCCCTACGCCGTGGTCGCGGGCAACCCGGCCCGCGTCATCCGCATGCGCTTCGACCAGCCGACCATCGACCGGCTCCA
GGCCGTCCGCTGGTGGGACTGGCCCCTGGACAGGATTCTGGCCCGGCGCGAGGCCATCTCCGGCGCGGACCTGACCGCCC
TGGAAGGCTGA

Protein sequence : 
MLDPTARHPMVLPDGTVVKTVVNLNQVVDHPRMEIGDFSYYSNFNPVEDYAAAIAPYLFPLSPERLVIGRFVQIAHGVVF
ITSSANHDMRGFSTYPFWNFTMTPETGFDEVKALFNLPGRKGDTVIGNDVWLGMEAVVMPGVTIGDGAIIGARSVVGCDV
PPYAVVAGNPARVIRMRFDQPTIDRLQAVRWWDWPLDRILARREAISGADLTALEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 2e-27 42
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 3e-27 42
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 3e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DND132_1885 YP_005167894.1 flagellar repeat-containing transferase NC_002516.2.878374.p Protein 2e-25 45
DND132_1885 YP_005167894.1 flagellar repeat-containing transferase AY123251.gene2.p01 Protein 6e-28 42
DND132_1885 YP_005167894.1 flagellar repeat-containing transferase AY740681.1.gene5.p01 Protein 1e-27 42
DND132_1885 YP_005167894.1 flagellar repeat-containing transferase AF322577.2.gene4.p01 Protein 1e-27 42