Gene Information

Name : DND132_1787 (DND132_1787)
Accession : YP_005167796.1
Strain : Desulfovibrio desulfuricans ND132
Genome accession: NC_016803
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1984331 - 1985059 bp
Length : 729 bp
Strand : -
Note : KEGG: pca:Pcar_0269 ABC-type transport system, ATP-binding component; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGAACCGGCCATCTCCCTGAACGGGATCACCAAGACCTTCCTCCAGGGCAAGGGCGACGAGTCCGACCCCGGCATCAA
GGTCCTCAAGGGCATCACCCTGGACGTGGCCCCCGGCGAGTTCATCGCCCTGCAGGGCACGTCCGGCTCGGGCAAGTCCA
CCCTGCTGCACATCATCGGCCTGCTCGACCGGCCCACCTCGGGCGTCTACCATCTGCTCGGCCGAGACGCCTCCAACCTC
GACGACGACCAGCAGTCCGACCTGCGCAACAAGGCGCTCGGCTTCGTGTTTCAGTCCTTCTACCTGATCTCCTACGCCAC
CGCCCTGGAGAACGTCATCCTGCCCGGCCTCTACTCCGGCAGGCCGCGCGCCGAACTGCTCTCAAGGGCCGAGGCCCTCC
TCGAACGCGTGGGCCTGGCCGACCGCATGCACTTCAAGCCCTCGCGCCTGTCCGGCGGCCAGCAGCAGCGTGTGGCCATG
GCCCGGGCCCTGCTCAACGACCCGCGGATACTCCTGGCCGACGAACCCACGGGCCAGCTCGACTCCAACACCTCGGCCGA
GATCATGAAGCTCTTCCACGACGTGCACCGCGCCGGGCAGACCATCGTCCTCGTCACCCACGACGAGGACGTGGCCCGCG
AGGCCGACCGCATCATCCGCCTCCACGACGGCCGCATCGCCGAGGACGTGAAAACAAATGCCTCCGGCGGCCAGGGGGGA
AACTTTTGA

Protein sequence : 
MEPAISLNGITKTFLQGKGDESDPGIKVLKGITLDVAPGEFIALQGTSGSGKSTLLHIIGLLDRPTSGVYHLLGRDASNL
DDDQQSDLRNKALGFVFQSFYLISYATALENVILPGLYSGRPRAELLSRAEALLERVGLADRMHFKPSRLSGGQQQRVAM
ARALLNDPRILLADEPTGQLDSNTSAEIMKLFHDVHRAGQTIVLVTHDEDVAREADRIIRLHDGRIAEDVKTNASGGQGG
NF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 44
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-15 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DND132_1787 YP_005167796.1 ABC transporter NC_012469.1.7686878. Protein 9e-45 49
DND132_1787 YP_005167796.1 ABC transporter CP001581.1.gene598.p Protein 2e-35 45
DND132_1787 YP_005167796.1 ABC transporter NC_008702.1.4606598. Protein 2e-36 43
DND132_1787 YP_005167796.1 ABC transporter CP001581.1.gene798.p Protein 1e-32 42