Gene Information

Name : frgD (CDHC02_0969)
Accession : YP_005164752.1
Strain : Corynebacterium diphtheriae HC02
Genome accession: NC_016802
Putative virulence/resistance : Virulence
Product : iron-siderophore uptake system exported solute-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1010148 - 1011191 bp
Length : 1044 bp
Strand : +
Note : -

DNA sequence : 
ATGTTCGAAATATCCCGATCTCGTGCGAAAGCAATGCGTCCTTTCCTTGCCCTCGCCACAGCCACTGTAATGATGCTGTC
CCTCGCAGCGTGTTCTTCTTCTGACAATTCCTCGACTAACGCTCAAGGTAACACTGATGTTGCCGTGGGCGGCCAGCGTT
TTAGCACCGCTGATCAAGAAACTGCCAAGCTTGGTAGCGATGCACAACCTGGTCAATTCCCACGTACCGTCGTTCATGCT
GCTGGAACAACGGAGATCAAAACAAAGCCCGAGCGTGTTGTTGTCCTTGATACCGGTGAATTAGATAGCGTCTTGTCGCT
TGGGATCACCCCAGTAGGAATGACCACTACCAAGGGTGCTAGTCCAGTGCCGAGCTATCTCGCCGACAAAGTAAAAGACG
TGGAGCGAGTTGGCACTATCAACGAGCTTAATATCGAGGCAATTGCGGCTTTGAAGCCCGACCTGATTATTGGTTCGCAA
TTGCGTGCCGACAAACTGTATCCGCAGCTTTCTGACATTGCGCCTACGGTTTTTTCCATCCGACCAGGTTCTCCATGGAA
GGAAAACTTCCTCCTCGTTGGCGAGGCACTTGGTATGGAGAAAGAAGCGGAAGAAAAACTGAATGAGTATGCTGACCGCG
TTACTGAGCTAAAGAATAACGTTCCCCAAAATACTGAGGTTTCTCTCGTTAGGTTTATGCCTAACAAGCTGAGGCTGTAT
GGAAACAAGTCGTTGATCGGTGTTGTTCTTGCCGATGCTGGGCTTGCTCGCCCAGAAAAGCAAAACGTTGATGATCTTGC
TGTTGAAATTTCTCCAGAAAACATCGATCAAGCTGCAGGATCGGTCATCTTCTATACTTCCTACGGAAAACCAGATGCTA
CAGGGGAAACCGCTGTAGTTGAGGGGCCGGCATGGAAAAACCTTGAAGCAGTGGCTGCGGGTAAGGCCTACCGCGTTAAT
GACGATGTGTGGTTCCTTGGTCTAGGGCCAACAGGCGCTATGGAGATTGTCTCGGACCTTCACCACTACTTACTGAAGAA
ATAA

Protein sequence : 
MFEISRSRAKAMRPFLALATATVMMLSLAACSSSDNSSTNAQGNTDVAVGGQRFSTADQETAKLGSDAQPGQFPRTVVHA
AGTTEIKTKPERVVVLDTGELDSVLSLGITPVGMTTTKGASPVPSYLADKVKDVERVGTINELNIEAIAALKPDLIIGSQ
LRADKLYPQLSDIAPTVFSIRPGSPWKENFLLVGEALGMEKEAEEKLNEYADRVTELKNNVPQNTEVSLVRFMPNKLRLY
GNKSLIGVVLADAGLARPEKQNVDDLAVEISPENIDQAAGSVIFYTSYGKPDATGETAVVEGPAWKNLEAVAAGKAYRVN
DDVWFLGLGPTGAMEIVSDLHHYLLKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 7e-113 76
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 5e-113 76
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 5e-113 76
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 5e-113 76