Gene Information

Name : CDHC02_0072 (CDHC02_0072)
Accession : YP_005163861.1
Strain : Corynebacterium diphtheriae HC02
Genome accession: NC_016802
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 72561 - 72950 bp
Length : 390 bp
Strand : +
Note : Predicted transcriptional regulators

DNA sequence : 
ATGCGAATCGGTGAAGTTGCTGATGCTGCCGGTATAACAACCAAGACGATCAGGTTCTATGAGGACCGGGGCCTGCTCCC
ACCGGCTGAGCGCTCGGCCAACGGCTATCGTGACTACACCCACGACACCCTCAGCCGCCTCGAATTCATTCGCCGCAGCC
AAATCGCCGGGCTGACCCTGGCGCAGATCCAGGGCATTCTGCGGATCCGCGATAGCGGTTTGACGCCTTGCACCCACGTA
CGGGATGTCCTGGGGAAACAGTTGCAGGACCTGGACCGGAAAATCGCGGAGCTCACCGCGCTCCGGGTGACCGTGGCCGA
ACAATATGCAACCGCCGAGGTGGCCGACCCTCAGCGCTGCGATGCTGAACAAATCTGCAGTTACATCTGA

Protein sequence : 
MRIGEVADAAGITTKTIRFYEDRGLLPPAERSANGYRDYTHDTLSRLEFIRRSQIAGLTLAQIQGILRIRDSGLTPCTHV
RDVLGKQLQDLDRKIAELTALRVTVAEQYATAEVADPQRCDAEQICSYI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 3e-20 46
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 5e-20 46
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 5e-20 46
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 4e-20 46
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 4e-20 46
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 4e-20 46
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 5e-20 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDHC02_0072 YP_005163861.1 MerR family transcriptional regulator BAC0682 Protein 1e-16 42