Gene Information

Name : CDHC02_0395 (CDHC02_0395)
Accession : YP_005164182.1
Strain : Corynebacterium diphtheriae HC02
Genome accession: NC_016802
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 398406 - 399122 bp
Length : 717 bp
Strand : -
Note : -

DNA sequence : 
ATGCCAGCACTCATCACAGCCACCGGAGTGAAGAAAAGCTTCGGTAAAGGTAGTCAGAAAGTAACAGTTCTCAAGGGAAT
TGATCTCACTATTTTACCTGGAGAATCTGTTGCAATTGTCGGAAAATCTGGTTCAGGAAAATCTACATTACTGTACTGCT
TAAGTGGATTACTCGCACCCGATGAAGGATCTATCTACCTAGCCAATCAGAACATCACCGCCACCTCGCCACGAAAAGTC
GCTGAGATCAGGAGAAATCACGCAAGTTTCATTTTCCAAGACTTAAACCTCATTAGCTCCCTGACGGTCGCCGACAACAT
CCGGCTTCCTTCAAAGCTTGCTGGCCGAAACCCCAAAAAACGCGAAATCGACTCAGTTCTTGAAAAAGTGGGGCTGTCAG
GAGCTGGCAATAAGTATCCAAACCAATTATCCGGAGGACAACAGCAACGCGTAGCTATCGCACGTTCTCTTGTCAGATCT
CCCCAGATACTCTTTGCCGACGAACCGACCGGAGCACTAGACGTTACAACCAGCGCAATTATCCTAAAACTACTTCAAGA
AACGGTCACCAAGAGAACTTCTCTAGTTATGGTCACACATGATCTGGATATTGCAGCATCAGCTGACCGTGTTGTGGTGC
TAAAAGAAGGAAACACAGGTCAAATTCTCCATCACACAACACCAACAAACATATTTGATGCTATGCATAAGAGTTAG

Protein sequence : 
MPALITATGVKKSFGKGSQKVTVLKGIDLTILPGESVAIVGKSGSGKSTLLYCLSGLLAPDEGSIYLANQNITATSPRKV
AEIRRNHASFIFQDLNLISSLTVADNIRLPSKLAGRNPKKREIDSVLEKVGLSGAGNKYPNQLSGGQQQRVAIARSLVRS
PQILFADEPTGALDVTTSAIILKLLQETVTKRTSLVMVTHDLDIAASADRVVVLKEGNTGQILHHTTPTNIFDAMHKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-79 80
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-87 77
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-87 77
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-87 77

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDHC02_0395 YP_005164182.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-38 42
CDHC02_0395 YP_005164182.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-33 41
CDHC02_0395 YP_005164182.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-31 41