Gene Information

Name : CDHC02_0244 (CDHC02_0244)
Accession : YP_005164031.1
Strain : Corynebacterium diphtheriae HC02
Genome accession: NC_016802
Putative virulence/resistance : Unknown
Product : ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 241464 - 243017 bp
Length : 1554 bp
Strand : -
Note : -

DNA sequence :
ATGAGAACTGGTTTGTGGATTTTTTCGGTGGTGGCGATCGCCGCGGTGGCGGTGGGCATTCCTTATGCCATGTTATTGAA
AGCGGCGGGGACGGGCACTGCGGCGGTCGCACCGATCATCCTCAGCAGCACAATTGCATTGTGTGCAACTTTGTTGGCGG
TGGGTATTGGCACGGTGGGCGCGTTGGCGGCGGCGCAGTTTTCTCGTACTGCAGTATTGCTTCTCGACGTTATCCTGCTG
TTCCAGCTCACTATCCCGCATTTTGTTATCGGTGCTGGTTGGAAGACGATCATGGGCCGCACGGGTATTCACCTGTGCTC
GCAGTGTAATTTTTCGGGCCTTGGGCCGTTGTTGTTCACGTTCACGGTGGCGTTTACCCCGTTGGCATATTTTGTGCAGC
GTACGGCGTTGCGCTCGGTGTCGTCGCGTGAGGTGGATGCGGCTCGGGTGGCGGGCCTTCATGGGTGGGCGTTGTTTCGC
GCGGTGTATCAGCCGCGGTTGGTGTTGTTTGCCCCTGCGCTTGCAGTGTTTATTTTTAGTGCGGCGTTGTCGGATCCGGT
AACGCCGAATGTGATGGCTCCGCGGGCGTCGTTGGCGGCAACACGGGTGTGGTTCCAAGGCGATCAGGCGGGGACTGCGC
TGGCACTTACGTTGCCGGTGGCTGGTGCGGTGGTCGTTGCGGGGCTGGTGTATGCACGGCTGTTGCGTAGTAATCCGGCG
TTGGTGGAGTTGCTTCATTTTGCTGGTGATTCTTCCGGACAGCCACATCGTGCAGTGGGTGCGCAGGTGCGTGCCCCGCA
GGCAGTGTTGTGCTTCTTAGGTGCAGTTGCGGGATTATTTGTGCTGGTGGCGGCCTATCGTGGTTTTGTGCATGGTTCTG
AGACGCCGATGGGCAATGCGGTGGTCAATACGGTGGGGTTGGCGTTTTTGGTGTTGTTGTGTTCGTTGTTGTTGTCGACG
GTTGCGTTGGGGGCGCGGCGTTCGTGTGGCCTGCGGTGGGGTTGGTTGGGCCGGCGTGGTGTTGATGCGGTGTTTGCGTT
GTTGGCGTTGTTGCCGGGGGCTGCGATTGGTTGTGGTTTGCAGATTGCGTTGAATCATCCTGGGGTGTATGGGCCGTGGG
CGTCGTTAAGTTTGGTGTTGTTGGCGTGTCTGCCGAGTTCGCTGGCTATGACGTATTTTTTGATGGTTTATATCGGTCCG
TTGATGTCACGTTCGGAGTATATGGTGTCGTTGTTGCAGGGTGTTGGTCCGCTGCGGGCGGTGGCGTCGATTGTGTTGCC
GCGTTCGACGAATGTGGTGATTTTGGGCTTTTTAATGGTGTTTTCTAATGCGTCGGTACTAGCGGTGCCGTTGTTGTGGG
TGAGTTCGCCGGATACTCCCCTACTGATGTTGCGGCTTTTCACGCTTCTCGACGCCGCCAATTACCCGGCGGCGCTGTAC
ATCAGCATGACTGTGTCTCTTTTTATCGTGTCCCTTGCTGGGGCGATCGTTGTGAGTATTAATGGCGTGGGCTTGGCTGC
CTTCGCTAGGAAACAGGTGGCACCATGGCGTTAA

Protein sequence :
MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTIALCATLLAVGIGTVGALAAAQFSRTAVLLLDVILL
FQLTIPHFVIGAGWKTIMGRTGIHLCSQCNFSGLGPLLFTFTVAFTPLAYFVQRTALRSVSSREVDAARVAGLHGWALFR
AVYQPRLVLFAPALAVFIFSAALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA
LVELLHFAGDSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAYRGFVHGSETPMGNAVVNTVGLAFLVLLCSLLLST
VALGARRSCGLRWGWLGRRGVDAVFALLALLPGAAIGCGLQIALNHPGVYGPWASLSLVLLACLPSSLAMTYFLMVYIGP
LMSRSEYMVSLLQGVGPLRAVASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY
ISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVAPWR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0206 YP_005126719.1 ABC transporter permease protein Not tested Not named Protein 1e-161 99
potC YP_005682547.1 Spermidine/putrescine transport system permease PotC Not tested PiCp 3 Protein 4e-133 90
potC YP_005684638.1 Spermidine/putrescine transport system permease PotC Not tested PiCp 3 Protein 4e-133 90
cpfrc_00180 YP_003782580.1 hypothetical protein Not tested PiCp 3 Protein 1e-146 88
potC YP_005680456.1 Spermidine/putrescine transport system permease PotC Not tested PiCp 3 Protein 1e-146 88