Gene Information

Name : CDHC02_0236 (CDHC02_0236)
Accession : YP_005164023.1
Strain : Corynebacterium diphtheriae HC02
Genome accession: NC_016802
Putative virulence/resistance : Unknown
Product : putative surface-anchored fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 231245 - 234091 bp
Length : 2847 bp
Strand : +
Note : Predicted outer membrane protein

DNA sequence :
ATGAAAACGGCTCCCTCAACGCAGGAAACAACACTCTTGAAATCGGAAAGGGCACTCATGCGCTCGCTCGCACGAAAACT
TGCGGCCATAGGCCTCGTATTCGGCCTCACGCTTCCGTCAACAGTTTCCGCACAAGATATTTTAAATAGTTTGACTGTGG
AAGGTGAAGATCGGCTCGGCAGCACTCCGCAACCATGGGATGGAAGTCACTTAGATACTAGTCCAAACACTCTTTTTAAT
GAGGGTGCTGCAGATGATGGGGCTAATGGCGTGCTGGAGTCGGAAAGTGGAGATGAAACGCCTGTAAAGCCGGAAGACGG
TGTGCCTATCGTTCAGCCGGCAGCATCGCCGGTTGAAGGTGCGTTGAGTTGTAAGCCTGGTGAATTTTATGGCCTAACTA
CAAATACGGGAACGTTATATAAGGCAACGATTTCCGGTAATGAAATAACTACCCAAAGCGTGTCTGGTAAATTCTCCGAA
CAATGGGTACAGCAGACAAATGGCTTAGCTATCGGGTATCAAGGGACCTTTGCATATGCATATGATAAACGATCTTACGG
CTCCGATCCCTATGTTGATTTAAGGATTTGGACGCCTCAAAACGGTTTTAGCAGCGTTAAAAAAATACGTTTGGGTTCTG
TAAGAACGACTGATTTTGGTGTGGCCAATTTAGTGGCTGGTGCTGCCAAATTGGAATTTGGAAATAGAGATTTTTATTTT
GGTGGCTATTCGAACGACTGGGATAAGGGCGTAAAGAAAAAGTATTTTAATCTGTGGAAGTATACGGAAAAGTCACAATC
GACTCAGTATCTTGGCTATATCAATACCGGAAAAGATTCCGACAGTGCAATAAGCGCAAACGGAGACTTGGCCTTTAATG
ATAACGGCGATATGTATCTCCTCTTGAATGACGGAAAAGAATCACAAGTTTTTACCGTTACTGCGGAAGATCTCGCTAGG
GCTGAAAATCAAGTCGGCACGGATAGCGAAGATTTTCTCACTAACGAGCACACAGAGCTGAAGTCGCAGGATGGTAGGAC
TCTTTCTACCGTTTCAGGGAAAACCTTGAACGGTTTTGCTTTGAATAGTGATGGTACTTTGTTGGTAGCTTCTGCTAATA
GCCTTTATCAAATTGACCCTAATGTTGAAGACATTGTTGCGAGTGGGGAGCTATTGGGAATCTCTAGTGGTGATTTGGCT
TCTTGTCAAACTCCGCCAACGCTTGAATTAAAGAAAAAAGTAAACAATCGTGCAAAACCCTCTGATCAATTTAAGCTATC
AATAACTCGTGTAAGCAATGATGAGCGCATAGTTACGGGTGAAGTAGATACAAACGGTAATCAGTTGGGGGAGCAATCGG
ATAAAGTGGGTCCTTTGCCTGTTCGATCTGGCCAAACTTATATTCTGCGTGAAGACAAGCCAGAGAGTAATTCTCATGAA
AAAGAAACTGATATCCGTGATTATTCGGCTTCATTGACATGTGTCAACGAAGGGGGTGGTAGTGATATCAAGCCACATAA
AGAGAATGAGTATGAATATTCTCTAACAATCCCAGAAATAGCATCTTCTGTAAATCATGTGGCCATTAGTTGTACTTTTG
AAAATTCTGTTAGAGGCGGGGCTGTTAAATGGGAAAAATTAGGTGAAGCAGCCGATCCCAATGGTGCTAATTTTCCCTTA
GGTGATACGGAATGGGAAATTATCCGTAGGGATGGTCAGCCTAATGATGTTAAGTCTTGGAAAATTAGCGATTGTGTAAC
TGAGCAACCTAGTTGTGGTCTTCGTAACGATGACGATGTTGTTGACGGCGATAATCAGCTAGGAAAGTTCCTAGTCAGAA
ATCTTCCCTTTGGAACTTATGAACTCCGTGAAACTAAAACTGGTGACGATTATAAGATTCTAGATTCCGGTATTGAATTT
ACGATATCTGAAGGAATTAACTCTAACTCGAATCCAGTTTCTCTGGGCCAAATTCTTAATAAAAGGCATACCGGTTCTGT
GGCGTGGAAAAAAGCTGACTCCAGAGATCAAATGCGCCTATTAGGTGGGTCTAAGTGGAAACTAGTTTCGGAGGGTAAGG
CGGACATTGAAATCGAGGACTGCGTGTCCGGTGATTGCAAAGAATTATTAGATAAAGATCCTAACCGTGGTGCATTTAAG
ATTGAAAATATTGGGTTGGGAACTTATACCTTGATAGAAACAAATGCACCGGAAGGCTACGCCTTAGGAGATCCAGTATC
TAAAGAACTAGTATTGAGCAAAGAGCATGTTCATAAGGGCCTTGATTTAGGTACTATCTCGAACCAAGTTATTCAAGGTT
CGGTCACATGGGAAAAAGCACATGCTGGTGACCCAACTGCGCTATTAGATGGATCTGAGTGGAGCCTTGAAAAGATTGAC
GGTCGAGTAGAGGGCGTAGAGGATTCTAAGCAAAAGTATTCAGTAACTATCAAGGATTGTTCGTCTGATGGTAGTAACTG
TGCGAAGCCAGACGATCCTTCTCTAGTTGATGCTTCTAAAGAAAAAGGAAAATTCCGCGTTGACGGACTAACAGCAGGAA
AATATCGTCTCGTTGAAAGCAAAGCTCCTATCCAGTTCAAATTGAATACCACTCCATTTGAGTTCGAAATCAGGTCAAAT
GGTGAAGTTGTTTCTGTCGGTAGGAAAGTGATGGATTCGGAAAGTCGAACAGAAAAAATTCTGCCGATCGAAAACGAGCC
AAAGAACGGCATCAAGCTCCCACTAACAGGTGGTATGGGCTCAGATATTTTCCGAATGGCAGGTGGTGTGCTCGGAATGA
TCGCTTTGATTGCTGGTGCTTGGTACGTGATTCGTCGTCGTGCATAA

Protein sequence :
MKTAPSTQETTLLKSERALMRSLARKLAAIGLVFGLTLPSTVSAQDILNSLTVEGEDRLGSTPQPWDGSHLDTSPNTLFN
EGAADDGANGVLESESGDETPVKPEDGVPIVQPAASPVEGALSCKPGEFYGLTTNTGTLYKATISGNEITTQSVSGKFSE
QWVQQTNGLAIGYQGTFAYAYDKRSYGSDPYVDLRIWTPQNGFSSVKKIRLGSVRTTDFGVANLVAGAAKLEFGNRDFYF
GGYSNDWDKGVKKKYFNLWKYTEKSQSTQYLGYINTGKDSDSAISANGDLAFNDNGDMYLLLNDGKESQVFTVTAEDLAR
AENQVGTDSEDFLTNEHTELKSQDGRTLSTVSGKTLNGFALNSDGTLLVASANSLYQIDPNVEDIVASGELLGISSGDLA
SCQTPPTLELKKKVNNRAKPSDQFKLSITRVSNDERIVTGEVDTNGNQLGEQSDKVGPLPVRSGQTYILREDKPESNSHE
KETDIRDYSASLTCVNEGGGSDIKPHKENEYEYSLTIPEIASSVNHVAISCTFENSVRGGAVKWEKLGEAADPNGANFPL
GDTEWEIIRRDGQPNDVKSWKISDCVTEQPSCGLRNDDDVVDGDNQLGKFLVRNLPFGTYELRETKTGDDYKILDSGIEF
TISEGINSNSNPVSLGQILNKRHTGSVAWKKADSRDQMRLLGGSKWKLVSEGKADIEIEDCVSGDCKELLDKDPNRGAFK
IENIGLGTYTLIETNAPEGYALGDPVSKELVLSKEHVHKGLDLGTISNQVIQGSVTWEKAHAGDPTALLDGSEWSLEKID
GRVEGVEDSKQKYSVTIKDCSSDGSNCAKPDDPSLVDASKEKGKFRVDGLTAGKYRLVESKAPIQFKLNTTPFEFEIRSN
GEVVSVGRKVMDSESRTEKILPIENEPKNGIKLPLTGGMGSDIFRMAGGVLGMIALIAGAWYVIRRRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaG YP_005126711.1 putative surface-anchored fimbrial subunit Not tested Not named Protein 0.0 76