Gene Information

Name : srtC (CDHC02_0193)
Accession : YP_005163980.1
Strain : Corynebacterium diphtheriae HC02
Genome accession: NC_016802
Putative virulence/resistance : Unknown
Product : fimbrial associated sortase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 181080 - 182018 bp
Length : 939 bp
Strand : +
Note : Sortase (surface protein transpeptidase)

DNA sequence :
GTGGATCACACCCTCAGCACTGACGTCGAACCGGAGAAGGAACCGCGCCGTGCCAACAGCGCCAAAACCAGCCCCGTGCT
GGCCGCGGTGCTCGTGATCCTCGGGGTGCTCGTGATGCTGTACCCGGTGACGTCCACCCTGTGGAATAACCACCTAGCCA
CGAAGGCCGCGCAGGAATACGCAAAACTCGAAAAGAATGCCCCACAAGAGGTGAAGAACACCCAGTGGGAGCGTGCCCAC
GAGTACAACGAGAACCGAACAACCGGCCCCATCTTTGACCCCTGGCTCGCCCGCTTCGACGAGAACAACTCGGACTACCA
AGAATACTTGGACCAACTCGATGCGAACGACGCGATGGCGCGCCTCATCTTCCCGAAGATCAAGGCAGACCTGCCGATTT
TCCACGGGACAGATAACGACACTTTGCAAAAAGGCTTGGGGCACCTCTTCGGCTCCGATCTGCCAGTCGGCGGTAAGGGC
ACGCACTCGGTGATCACCGGCCACACGGGCCTGGCAAACTCCACCATGTTCGACCACCTCAACAAGGCGGAGAAGGGTGA
TGTCTTCTACGTCCAGGTCTCCGGCGAGAAGCTGAAGTACGTGGTCGACCAGATCAAGGTTGTGCTCCCCACCGAAACCG
AGGATCTCCGCCCGGAGCAGGGCAAGGACTACATCACCCTGATCACCTGCACCCCTTATGGGATCAACACGCACCGCCTG
CTGGTGCGCGGCCACCAAGTCCCGCTGGACCCGGAGGATCACGAGGTTTTCGACAAGGACCACGGTGCTGGGTGGCAGTG
GTGGATGTACGTGCTCCTCGCGGCAGCAGCTGTTGTGCTGCTCCTGCTGCTGCGGTGGCTGCTGAAGAACAAGCGGGATG
GCGAATCCCAAGAAACGACAGAGACGATGAATGACGAAGGGGCTGGAGCAGATGACTAG

Protein sequence :
MDHTLSTDVEPEKEPRRANSAKTSPVLAAVLVILGVLVMLYPVTSTLWNNHLATKAAQEYAKLEKNAPQEVKNTQWERAH
EYNENRTTGPIFDPWLARFDENNSDYQEYLDQLDANDAMARLIFPKIKADLPIFHGTDNDTLQKGLGHLFGSDLPVGGKG
THSVITGHTGLANSTMFDHLNKAEKGDVFYVQVSGEKLKYVVDQIKVVLPTETEDLRPEQGKDYITLITCTPYGINTHRL
LVRGHQVPLDPEDHEVFDKDHGAGWQWWMYVLLAAAAVVLLLLLRWLLKNKRDGESQETTETMNDEGAGADD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 8e-124 98
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-77 63
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 3e-67 58
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 3e-60 57
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-53 50
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-53 47
srtH YP_005139151.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-37 45
srtH YP_005126713.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 9e-35 41