Gene Information

Name : srtB (CDHC02_0191)
Accession : YP_005163978.1
Strain : Corynebacterium diphtheriae HC02
Genome accession: NC_016802
Putative virulence/resistance : Unknown
Product : fimbrial associated sortase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 177806 - 178750 bp
Length : 945 bp
Strand : -
Note : Sortase (surface protein transpeptidase)

DNA sequence :
ATGACAAACCAACCTCCAACGCCGAACACGACGGACGCGACCCCGCCCCGCCAAGACAAGAAACTGAACACCAACGCGAT
CATTGCCGTCGTCCTCATCCTCGCCGGCCTGGGCGTATTGCTATACCCGGTGCTCGCCACCCAGTGGAATAACTACCAGC
AGTCCCGCGCCGCCGAGGCCTACTCTCAGCTGGAAAAGGGCGTGCCCCCAGAGGTCCTCAATAAGGCCTGGGAGGAGGCG
CAGCAATACAACGCCAACCTCGGGGATATCGACCCCGGCGATGCGTGGACCAGCTCCGACGACGAGAGCTCCCCAGCGTA
TCAGCGCTACCTGAAGTACCTCTCCGTCCTGAACGAGACCGAGGCCATGGGCCGCATTGTACTGCCCTCCATCAAGTCCG
ACCTGCCAATCTTCCACGGCACCTCCGACCGCGTGCTGGCCCGCGGGGTCGGCCACCTTTACGGCACGGACCTGCCTGTT
GGCGCACCCGGCGAGCTCGGCGAGGATGGCACTATCCCGCCCGCCCCACCAGAGGGCCGACTCTCCGCACTTTCTGCCCA
TACCGGCCTGCAGAACGCCACCCTGTGGGACAACCTCAACCAGATCAAGAAGGGCGACCCGGTCTACGTCGCCGCGGCGG
GCGAGAAGCTGAAGTACGAGGTCCGGGACATCGAGGTCGTCACCCCGGATAAGACCAGCCTGCTACGCCGCACGCCGAAT
AAGGACCTGGTCACGCTCATCACCTGCACCCCCTATGGCATCAACACCCACCGGCTGATCATCACCGCCGAGCGCGTGCC
GATGGACCCGCAGGAAGAGTCCGTCTTCGACGGGCAGGGCACCACCTGGCAGTGGTGGATGTGGGCCATCCTCGCTGCCG
CGGCGATCATCGTGCTGCTGCTGATCCGCTGGTGGTGGAAGAACTTCCGCAAGCAAGAAGGCTAG

Protein sequence :
MTNQPPTPNTTDATPPRQDKKLNTNAIIAVVLILAGLGVLLYPVLATQWNNYQQSRAAEAYSQLEKGVPPEVLNKAWEEA
QQYNANLGDIDPGDAWTSSDDESSPAYQRYLKYLSVLNETEAMGRIVLPSIKSDLPIFHGTSDRVLARGVGHLYGTDLPV
GAPGELGEDGTIPPAPPEGRLSALSAHTGLQNATLWDNLNQIKKGDPVYVAAAGEKLKYEVRDIEVVTPDKTSLLRRTPN
KDLVTLITCTPYGINTHRLIITAERVPMDPQEESVFDGQGTTWQWWMWAILAAAAIIVLLLIRWWWKNFRKQEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 1e-107 97
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 3e-65 60
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-53 50
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-46 47
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 4e-49 47
srtE YP_005139150.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-45 46
srtI YP_005126714.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-37 45
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-40 42