Gene Information

Name : srtA (CDHC02_1898)
Accession : YP_005165678.1
Strain : Corynebacterium diphtheriae HC02
Genome accession: NC_016802
Putative virulence/resistance : Unknown
Product : fimbrial associated sortase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2041946 - 2042815 bp
Length : 870 bp
Strand : -
Note : Sortase (surface protein transpeptidase)

DNA sequence :
ATGAGGCACCGGGCAGGTGAACATCGAAACGTTTTTGCCATCCTCGCATTCGTCATCGCGATCGTCTCAGTGGGATTTTT
GCTCTACCCCGTGGCCGCAACCGCATGGAACAACGCGCGCCAAGCACGCGTCGCACAGTCCTACGAGAACAGCTACGAGG
TAGACAGCCCAGCGGTACGAGACAGCGTTCTTGAGGCGGCCAGACAGTACAACACGTCGGTAGTAGGCTTCCCGATCCTC
GATCCGTGGCTGAACAGGGCGTCGAAAAACAGCGGGCCATACCTCGACTACCTGCAACAACTCAACCCGCAGCGCGCCGA
ACGTCCCGTCATAGCGTCGATAAGCATCCCTACTATCGACGCCCACCTGCCCATCTACCACGGCACCGACACCGCCACCC
TCGAGCACGGACTCGGCCACCTATACGGCTCCGCGCTACCCGTTGGCGGCACCGGCACCCACCCCGTGATCACCGGACAC
AGCGGCCTTGCCAACGCCACCCTCTTTGACAACCTCGAAGACGTCAAAGAACACGACCCCATCTACATCACCGTCCAAGG
CGAAACCCTCAAATACGAAGTAGACGCCATCAACGTAGTCCTACCCGAAGACACCAAGCTCCTCGCCCCCGACCCCAACA
AAGACCAAATAACACTCATCACCTGCACCCCCTATGCCGTCAACTCCCACCGACTCCTCGTACGAGCCCACCGCGTAGAC
CTCGACCCCAACGACCCTAACCTCGCACAAACCGGTACCAAAATCTGGCAGCCCTGGATGCTGTGGACCGCAGCCCTAGC
ACTCGCCGCCATCGCCATCATCATCACCCTCGTGTTCCGCAGGAAGAGGACAACCACCCATGAAAACTAA

Protein sequence :
MRHRAGEHRNVFAILAFVIAIVSVGFLLYPVAATAWNNARQARVAQSYENSYEVDSPAVRDSVLEAARQYNTSVVGFPIL
DPWLNRASKNSGPYLDYLQQLNPQRAERPVIASISIPTIDAHLPIYHGTDTATLEHGLGHLYGSALPVGGTGTHPVITGH
SGLANATLFDNLEDVKEHDPIYITVQGETLKYEVDAINVVLPEDTKLLAPDPNKDQITLITCTPYAVNSHRLLVRAHRVD
LDPNDPNLAQTGTKIWQPWMLWTAALALAAIAIIITLVFRRKRTTTHEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 1e-123 99
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 6e-52 50
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 6e-56 49
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 7e-55 48
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 1e-55 47
srtH YP_005139151.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-40 45
srtE YP_005139150.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-45 44
srtI YP_005126714.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 6e-42 42
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-47 41
srtH YP_005126713.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 8e-36 41