Gene Information

Name : CDHC02_1659 (CDHC02_1659)
Accession : YP_005165439.1
Strain : Corynebacterium diphtheriae HC02
Genome accession: NC_016802
Putative virulence/resistance : Unknown
Product : phage-associated protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1778360 - 1779721 bp
Length : 1362 bp
Strand : -
Note : Superfamily II DNA/RNA helicases, SNF2 family

DNA sequence :
ATGCGCTACGAGCCGCATGACTACCAACGACAGGCCACCGCCTTCGTTGAAGACCACCCGCAGGCCGCGATCCTGCTCGG
GATGGGGCTAGGCAAGACGGTGATCACCTTGACGGCAATCTGGAACCTGCTGCTGGACTCCTTCCACGCCCGCCGCGTCC
TCATCGTCGCACCCCTGCGAGTCGCCCGCGATACCTGGCCCGCCGAGGCCACCAAATGGGACCACCTGGCAGGACTCACC
ATTGCCGTGGCCGTGGGGTCGAAAGCCCAGCGGGTGGACGCGCTTGCCGCCGAGGCGATGGTGACCGTCATCAACCGCGA
AAACGTGCCCTGGCTGGTGCGCCACCTCGGCAAAGCCTGGCCGTTCGACATGGTCGTCATCGACGAGCTGAGCTCGTTTA
AGAACCACCGGGCGCAACGGTTCAAAGCACTCGCCGCCGTGCGGCCACGTCTCACCCGGATCGTGGGACTGACCGGCACG
CCAGCAGCCAACGGGCTGATGGACCTGTGGGCGCAGTTCCGTCTCCTTGATGAGGGCCAGCGCCTCGGCAGGTTCATCAC
CCACTACCGCAACCGCTGGTTCGTACCCGATCGGCGAAACGGCCAGCAGATCTTCACCTACAAGCCCGCACCCGGTGCCG
AGGACGAGATCTACGAGGCGATCAGCGACATCACCTTGTCGATGCGCACCACCGACTACCTGCGCCTGCCCGAGCTGACG
GTCACCACGACGCTCGTCGACCTCGAACCGAAGGAGCTCAAAGCCTACGAGCGGTTGCGAGATGAGATGGTGCTCGACCT
CGACGGGCAGGTCATCGATGCCGCGAACGCCGCAGCACTGTCAGGCAAGCTGCTACAGCTGGCCTCCGGTGCGATCTACG
ACGAGGACGGCAACACCGTGGTGGTGCACGACCGCAAGCTCGACGCGCTCGAAGACCTCGTGGAGGCGGCCAACGGCCAG
CCGCTGCTCGTGGCCTACTGGTTCAAACACGACCGTGAGCGCATCACCGAACGCTTCCCTGGGGCCCGCGAGCTGAAAAC
CAGTACCGACATCAAAGCGTGGAACGCCCGCGAGATTCCGCTGGCGCTCATCCACCCGGCCTCAGCCGGACACGGGCTCA
ACCTCCAGCAAGGCGGCAACCTCCTGGTCTGGTTCTCCCTGACCTGGTCCTTGGAGCTCTACCAACAGACCAACGCAAGG
CTCTACCGCCAGGGACAAGACCAGCCGGTGACGATCACCCACCTGGCCGCAGACCACACCCTCGATGAGGCGGTACTGGC
CGCGCTGGACAACAAAGACATGACACAGGCTGCGTTGATCAATGCGGTCGCCGACACTCTGGGAAAGCAGGCACACTCAT
GA

Protein sequence :
MRYEPHDYQRQATAFVEDHPQAAILLGMGLGKTVITLTAIWNLLLDSFHARRVLIVAPLRVARDTWPAEATKWDHLAGLT
IAVAVGSKAQRVDALAAEAMVTVINRENVPWLVRHLGKAWPFDMVVIDELSSFKNHRAQRFKALAAVRPRLTRIVGLTGT
PAANGLMDLWAQFRLLDEGQRLGRFITHYRNRWFVPDRRNGQQIFTYKPAPGAEDEIYEAISDITLSMRTTDYLRLPELT
VTTTLVDLEPKELKAYERLRDEMVLDLDGQVIDAANAAALSGKLLQLASGAIYDEDGNTVVVHDRKLDALEDLVEAANGQ
PLLVAYWFKHDRERITERFPGARELKTSTDIKAWNAREIPLALIHPASAGHGLNLQQGGNLLVWFSLTWSLELYQQTNAR
LYRQGQDQPVTITHLAADHTLDEAVLAALDNKDMTQAALINAVADTLGKQAHS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 3e-89 50
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 1e-92 49
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 1e-96 48
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 3e-92 47
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 4e-97 47