Gene Information

Name : CDHC02_1630 (CDHC02_1630)
Accession : YP_005165410.1
Strain : Corynebacterium diphtheriae HC02
Genome accession: NC_016802
Putative virulence/resistance : Unknown
Product : site-specific recombinase resolvase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1751438 - 1753027 bp
Length : 1590 bp
Strand : -
Note : Site-specific recombinases, DNA invertase Pin homologs

DNA sequence :
ATGGCCCGCACCGTCACAGCAATCCCCGCCACCCGAGCGCTCCACACTGGTGCACCACTTGGACAAACAACCCTGCGTAG
GGTCGCCGGGTATGCCCGCGTGTCCACCGACCACGACGATCAGGTCACGTCCTACGAAGCCCAAGTCGACTACTACACCC
GCTACATCAGCGACCACGCAGGCTGGCAGTTCGTGAAGGTCTATACCGATGAAGGTATCACCGGTACCTCAACCAAACAC
CGTGCCGGTTTCCAGCAGATGGTGACCGACGCGCTCGACGGCAAGATCGACCTGATCATCACCAAGAGCGTGTCCCGGTT
CGCCCGCAACACCGTCGACTCGCTGACCACCGTTCGAGCGCTCAAAGACAAAGGCGTGGAGGTCTACTTCGAGAAAGAAG
GCATCTGGACCTTCGACGCCAAAGGCGAGCTCCTCATCACCATCATGAGCTCGCTGGCGCAAGAAGAAGCCCGCTCGATC
TCGGAAAACGTCACCTGGGGACACCGCAAACGCTTCGCCGACGGCAAGGTCACCGTCCCATACTCTCGGTTCCTCGGATA
CGACAAAGGCAAAGACGGCAGCCTCGTCATCAACCCTGAGCAAGCCAAAACCGTGCGCCGGATCTACAACATGTACTTAA
GCGGCATGTCCATCGGCACGATCGCCCGCACCCTCACTGACGAACCAGAAACCTTCACCGCCGCAGGAAACAAGACCTGG
CATTACCAATCCATACGAGCGATTCTCACCAACGAGAAATACAAGGGTGACGCCCTCCTGCAAAAGTCGTACATCGCTGA
CTACCTGACGAAACGTCAAGTCATCAACCAAGGCGAAGTACCCCAGTACTACGTCACCGCCAGCCATGAGGCGATCATCA
GCCCCGCAGTGTGGGACTTCGTCCAAGCCGAGATAGCTAAAGGCGCTAGGGATCAGCGAACCCAGCATCGCACCCGGCCC
TTCTCATCGACCTTCGAGTGCAGCCAGTGCGGGCACTTCTTCGGCTCGAAAACCTGGCACGCGGGCAGTAAGTACGAAAA
GGTCATCTGGCGGTGCGGCCACAAATACGCAGGCCAGGAAAAATGCGCCACCGGACACATCAGCGATCAACGACTCAAGG
ACATGTTCCTTAAGGCCATTCGCCTTCGATTCGGCTCACCGACCGACACCGGCGTCAACCAAGCCGTTCTCGATGCCCTC
GACACGAGTGACCTGGAGGTTGAGGCCGCCGGGCTTCTCGCCCAGATCAACGAGGTGGCCAAGAAGCTCCAATCGATGAT
CGCCCACAATGCACGAGTCGCTCAAGACCAGCAAGCCTACGAAAAGGCATTCAGCGCTAGCCACGAACAGCACCAGGCAC
TGTTAGCTGAGCACGCTGCCGTGGTCGCCGAGATCCAGAACAAGAACAACCGACTAGCCGCCTACCACTACTACAGGCAG
GAGACCGCCAACCTTGAACTGGAACAGTTGGTCTTCAGCCCATACCTCTGCGTAGCTTTGCTCGACAAAGGCACCGTCGA
CGCCGACGGCAACGTCACCTTTCAATTCCGCGACGGCAGCACCCAAGTAGTCGCCATCAAGGCGGCCTAG

Protein sequence :
MARTVTAIPATRALHTGAPLGQTTLRRVAGYARVSTDHDDQVTSYEAQVDYYTRYISDHAGWQFVKVYTDEGITGTSTKH
RAGFQQMVTDALDGKIDLIITKSVSRFARNTVDSLTTVRALKDKGVEVYFEKEGIWTFDAKGELLITIMSSLAQEEARSI
SENVTWGHRKRFADGKVTVPYSRFLGYDKGKDGSLVINPEQAKTVRRIYNMYLSGMSIGTIARTLTDEPETFTAAGNKTW
HYQSIRAILTNEKYKGDALLQKSYIADYLTKRQVINQGEVPQYYVTASHEAIISPAVWDFVQAEIAKGARDQRTQHRTRP
FSSTFECSQCGHFFGSKTWHAGSKYEKVIWRCGHKYAGQEKCATGHISDQRLKDMFLKAIRLRFGSPTDTGVNQAVLDAL
DTSDLEVEAAGLLAQINEVAKKLQSMIAHNARVAQDQQAYEKAFSASHEQHQALLAEHAAVVAEIQNKNNRLAAYHYYRQ
ETANLELEQLVFSPYLCVALLDKGTVDADGNVTFQFRDGSTQVVAIKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1713 YP_003446815.1 site-specific recombinase Not tested The aminoglycoside resistance gene cluster Protein 4e-83 44