Gene Information

Name : srtB (CDC7B_0184)
Accession : YP_005161639.1
Strain : Corynebacterium diphtheriae C7 (beta)
Genome accession: NC_016801
Putative virulence/resistance : Unknown
Product : putative fimbrial associated sortase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 179041 - 179979 bp
Length : 939 bp
Strand : -
Note : Sortase (surface protein transpeptidase)

DNA sequence :
ATGGCCCGTAAGCAAGCAAAAAGCATTACAACGCCACACGCAGCTACTAGTATCCGAGCAGCAACTGTTAGATCCCACAA
AAAGAAGAGCAACCCCCTAATCGCCGTACTCATCATCTTGGTAGGCGTGGGCGTACTGCTCTACCCCGTGGTGGCCACGC
AATGGAATAACTTTGGCCAGCAGCGCGCTGCGGACGAGTACGCCAAGCTAGAGAAGTCCGCACCCCCAGAGGTACTCGAC
ACCGCATGGGAAGACGCACACCGCTATAACGAATCGCGTCCCGTCAGCGCACAGGTGATGGATGCGTGGAACGATCACGC
CGACGAGTCCTCACCGGAATACCAGCAGTATCTGCAGTATTTGTCGCAACTGGCAGAAACCGACGCCATGGGCCAGATCA
CGATTCCGTCGATTAAGTCCAAGCTGCCGATCTACCACGGCACCGGCCCCTCAGCTCTCGACCGCGGCGTGGGCCACCTC
TACGGCACCGACCTGCCCGTCGGCGGCGAAAACCGCCACGCAGTACTCTCCGCACACACCGGTATCCAAACCGCCACCCT
GTGGGACAACCTAGTCAAAGTAAAAGAAGGTGACGCCTTCTACGTGGCAGTCTCTGGCCACAAACTCAAATACGAAGTAG
ATCAGATCAAAGTGGTCACCCCAGACCACACCGATGACCTTGGCCGCGAACCCGGCAAAGACTACATCACGCTTATTACC
TGCACCCCCTACGGCATTAACACCCACCGCCTACTGGTGCGCGGACACCAAGTACCGATGGACCCCTCCGAAGAAAAGGT
CTTCGAGGAGTCCACAGTGGTATGGCAATGGTGGATGTGGGCCATCGTCGCCGCAGCCGCGTTCGTGCTGATCCTGCTCG
CGTGGTGGCTACGCAAAGGCACACTTCTTAACAAGAGACGCGATCAGTCAACGCAATAG

Protein sequence :
MARKQAKSITTPHAATSIRAATVRSHKKKSNPLIAVLIILVGVGVLLYPVVATQWNNFGQQRAADEYAKLEKSAPPEVLD
TAWEDAHRYNESRPVSAQVMDAWNDHADESSPEYQQYLQYLSQLAETDAMGQITIPSIKSKLPIYHGTGPSALDRGVGHL
YGTDLPVGGENRHAVLSAHTGIQTATLWDNLVKVKEGDAFYVAVSGHKLKYEVDQIKVVTPDHTDDLGREPGKDYITLIT
CTPYGINTHRLLVRGHQVPMDPSEEKVFEESTVVWQWWMWAIVAAAAFVLILLAWWLRKGTLLNKRRDQSTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-91 99
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-58 60
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 4e-53 58
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 6e-42 48
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 4e-41 47