Gene Information

Name : CDBH8_0234 (CDBH8_0234)
Accession : YP_005159326.1
Strain : Corynebacterium diphtheriae BH8
Genome accession: NC_016800
Putative virulence/resistance : Unknown
Product : ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 229689 - 231242 bp
Length : 1554 bp
Strand : -
Note : -

DNA sequence :
ATGAGAACTGGGTTGTGGATTTTTTCGGTGGTGGCGATCGCCGCGGTGGCGGTGGGCATTCCTTATGCCATGTTATTGAA
AGCGGCAGGGACGGGTCCCGCGGCGGTCGCACCGATCATCCTCAGTAGCACAATTGCATTGTGTGCAACTTTGTTGGCGG
TGGGTATTGGCACGGTGGGCGCGTTGGCGGCGGCGCAGTTTTCTCGTACTGCTGTATTGCTTCTCGACGTCATCTTGCTG
TTCCAGCTCACCATCCCGCATTTTGTTATCGGTGCTGGTTGGAAGACGATCATGGGACGCACAGGTATTCACGTGTGCTC
GCAGTGTAATTTTTTGGGCCTTGGGCCATTGTTGTTCACGTTCACGGTGGCGTTTACCCCGTTGGCATATTTTGTGCAGC
GTACGGTGTTGCGCTCGGTGTCGTCGCGTGAGGTTGATGCCGCTCGGGTGGCAGGCCTTCATGGGTGGGCGTTGTTTCGC
GCGGTGTATCAGCCGCGTTTGGTGTTGTTTGCCCCTGCGCTTGCAGTGTTTATTTTTAGTGCGGCGTTGTCGGATCCGGT
AACGCCGAATGTGATGGCGCCGCGGGCGTCGTTAGCGGCAACACGGGTGTGGTTCCAAGGCGATCAGGCGGGGACTGCGC
TGGCGCTTACGTTGCCGGTGGCTGGTGCGGTGGTCGTTGCGGGGCTGGTGTATGCACGGCTGTTGCGTAGTAATCCGGCG
TTGGTGGAGTTGCTTCATTTTGCTGGCAATTCTTCCGGCCAGCCACATCGTGCGGTGGGTGCGCAGGTGCGTGCCCCGCA
GGCGGTGTTGTGCTTCTTGGGTGCAGTTGCGGGATTATTTGTGCTGGTGGCGGCCTTTCGTGGTTTTGTGCATGGTTCTG
AGACGCCGATGGGCAATGCGGTGGTCAATACGGTGGGGTTGGCGTTTTTGGTTTTGTTGTGTTCGTTGTTGTTGTCGGCG
GTTGCGTTGGGGGCGCGGCGTTCGTGTGGCCTGCGGTGGGGTTGGTTGGGCCGGCGTGGTATTGATGCTGTGTTTGCGTT
GTTGGCGTTGTCGCCGGGGGCTGCGATTGGTTGTGGTTTGCAGATTGCGTCGAATCATCCTGGGGTGGATGGGCCGTGGG
CGTCGTTAAGTTTGGTGTTGTTGGCGTGTCTGCCGAGTTCGCTGGCTATGACGTATTTTTTGATGGTTTATGTCGGTCCG
TTGATGTCGCGTTCGGAGTATATGGTGTCGTTGTTGCAGGGTGTTGGCCCGCTGCGGGCGGTGGCGTCTATTGTGTTGCC
GCGTTCGACGAATGTGGTGATTTTGGGCTTTTTGATGGTGTTTTCTAATGCGTCGGTACTAGCGGTGCCGTTGTTGTGGG
TGAGTTCGCCGGATACTCCCCTTCTGATGTTGCGGCTTTTCACGCTTCTCGACGCAGCCAATTACCCGGCGGCGCTGTAC
ATCAGCATGACTGTGTCTCTTTTTATCGTGTCCCTTGCTGGGGCGATCGTTGTGAGTATTAATGGCGTGGGTTTGGCGGC
CTTCGCTAGGAAACAGGTGGCACCATGGCGTTAA

Protein sequence :
MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGPAAVAPIILSSTIALCATLLAVGIGTVGALAAAQFSRTAVLLLDVILL
FQLTIPHFVIGAGWKTIMGRTGIHVCSQCNFLGLGPLLFTFTVAFTPLAYFVQRTVLRSVSSREVDAARVAGLHGWALFR
AVYQPRLVLFAPALAVFIFSAALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAGAVVVAGLVYARLLRSNPA
LVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFVLVAAFRGFVHGSETPMGNAVVNTVGLAFLVLLCSLLLSA
VALGARRSCGLRWGWLGRRGIDAVFALLALSPGAAIGCGLQIASNHPGVDGPWASLSLVLLACLPSSLAMTYFLMVYVGP
LMSRSEYMVSLLQGVGPLRAVASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPDTPLLMLRLFTLLDAANYPAALY
ISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVAPWR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0206 YP_005126719.1 ABC transporter permease protein Not tested Not named Protein 1e-158 98
potC YP_005684638.1 Spermidine/putrescine transport system permease PotC Not tested PiCp 3 Protein 1e-129 89
potC YP_005682547.1 Spermidine/putrescine transport system permease PotC Not tested PiCp 3 Protein 1e-129 89
cpfrc_00180 YP_003782580.1 hypothetical protein Not tested PiCp 3 Protein 6e-143 87
potC YP_005680456.1 Spermidine/putrescine transport system permease PotC Not tested PiCp 3 Protein 4e-143 87