Gene Information

Name : CDBH8_2312 (CDBH8_2312)
Accession : YP_005161392.1
Strain : Corynebacterium diphtheriae BH8
Genome accession: NC_016800
Putative virulence/resistance : Unknown
Product : putative type I restriction/modification system DNA methylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2412444 - 2414051 bp
Length : 1608 bp
Strand : -
Note : -

DNA sequence :
ATGGTACGGAAGAAGAAGGAAGTGGCGCAGATCCCTTCCACCTCTAAGGAAATCAAGGACACATTGTGGAAGTCCGCGGA
TAAGCTTCGCGGTTCTATGGATGCGTCGCAGTACAAGGATGTTGCTCTGGGGCTGGTGTTCCTAAAGTATGTATCGGATT
CCTTTGAGGAACGTCAGAAGGAAATCCGCGCGGAGCTAGAAGGCAAGGGCTTCGATGAGGAAGACATCCTAGAAGATCTT
GCTGATGTTGACGCTTACACCAGCGAGAATGTTTTTTGGGTGGCGTCGAATGCCCGTTGGGACTTTCTAAAGAAGTATTC
CAAGGGCATGGAGCTGGAAGGAAAACACAAGTCCATCGGCAAGTTGATCGATGAGGCTATGCAGCAGCTCATGACGGATA
ATGAATCGCTACTGGGCACGCTGCCGCAGATTTATGGCAAGGACAATATCGACCAGCGCCGTCTCGGTGAATTAGTGGAC
CTGTTTAGCTCTACGTACTTTGCCAGCACTAAGGATAAGAAGGCCCGCGACCTACTTGGGGAGGTCTACGAGTACTTCTT
GGATAAGTTCGCCAAGGCCGAAGGTAAGAGGGGTGGCGAGTTTTATACGCCGCAGCCGGTCGTGCGGACGTTGGTAGAAA
TCCTTGAGCCGACTGAGGGGCGTGTGTATGACCCATGCTGTGGTTCGGGTGGCATGTTTGTGCAGGCGGAGAAGTTCTTG
GAGGCCACCAAGCGTGACCGCAGCAACATTGCGGTTTATGGTCAGGAACTCAATGAGCGTACGTGGCGGATGGCGAAGAT
GAACTTGGCTATTCACGCCATTAGTTCGTCCGGTTTGGGTGAGCGTTGGGGTGACACGTTTGCTCGCGATATTCATGCGG
GCACCAAGATGGACTACATCATGGCTAATCCGCCGTTCAACATTAAGGATTGGATTTGCAACGAGGAGGACGCCCGTTGG
AAGTACGGTGTGCCTCCGGCGAAGAATGCGAACTTTGCGTGGATGCAGCACATTATTTCGAAGCTGAAGGATCACGGCGA
GGCTGGTGTTGTGATGGCGAATGGCACGATGACGTCGCAAAGCTCTGGTGAGGGCGAAATCCGTAAGAACATGGTGGAAG
ACGATGTTGTTTCGTGTGTGATTGCGCTGCCGGCGCAGTTGTTCCGTGGCACGGGCATTCCGGTGTGCGTGTGGTTCTTT
GCCAAGGATAAGTCGGCGGGTGCTGGTGGCAGCGTTGATCGCCGTGGTGAGGTATTGCTTATCGACGCCCGCCAGCTCGG
CCACATGATCGACCGGACGGAGCGGGCGTTTAGTGATGAGGACATCGCCAAGATTGCTAATGCGTTCCGAACCTGGCGTG
GGCGTAAGTCCGCGGATGGGGAATACGAGGACGAGGCAGGCTTCTGTAAATCCGCGACGATTGAGGAGATCCGCGAAGCT
GGCTACGCGCTAACACCTGGCCGCTACGTGGGCATGCCTGAGGCCGAAGAAGACGATGAGCCTATCGACGAAAAGATCGC
ACGTCTAACCGCAGAATTGACTGCTGCATTGGACGAGTCTGCACGTTTGGACGCTGTCGTTCGCGAGCAGCTGGGGAGGT
TGAAGTGA

Protein sequence :
MVRKKKEVAQIPSTSKEIKDTLWKSADKLRGSMDASQYKDVALGLVFLKYVSDSFEERQKEIRAELEGKGFDEEDILEDL
ADVDAYTSENVFWVASNARWDFLKKYSKGMELEGKHKSIGKLIDEAMQQLMTDNESLLGTLPQIYGKDNIDQRRLGELVD
LFSSTYFASTKDKKARDLLGEVYEYFLDKFAKAEGKRGGEFYTPQPVVRTLVEILEPTEGRVYDPCCGSGGMFVQAEKFL
EATKRDRSNIAVYGQELNERTWRMAKMNLAIHAISSSGLGERWGDTFARDIHAGTKMDYIMANPPFNIKDWICNEEDARW
KYGVPPAKNANFAWMQHIISKLKDHGEAGVVMANGTMTSQSSGEGEIRKNMVEDDVVSCVIALPAQLFRGTGIPVCVWFF
AKDKSAGAGGSVDRRGEVLLIDARQLGHMIDRTERAFSDEDIAKIANAFRTWRGRKSADGEYEDEAGFCKSATIEEIREA
GYALTPGRYVGMPEAEEDDEPIDEKIARLTAELTAALDESARLDAVVREQLGRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdM YP_251979.1 type I restriction-modification system DNA methylase Not tested SCCmec Protein 5e-127 50
hsdM BAH57701.1 type I restriction-modification system DNA methylase Not tested Type-VII SCCmec Protein 6e-127 50
hsdM BAD24842.1 HsdM protein Not tested Type-V SCCmec Protein 4e-127 49
api49 CAF28523.1 putative HsdM-like N-methyl transferase Not tested YAPI Protein 3e-110 45