Gene Information

Name : irp1B (CDBH8_2110)
Accession : YP_005161192.1
Strain : Corynebacterium diphtheriae BH8
Genome accession: NC_016800
Putative virulence/resistance : Virulence
Product : Fe3+-siderophore ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2196461 - 2197381 bp
Length : 921 bp
Strand : -
Note : -

DNA sequence : 
ATGTTCGGCGTTCGCAGCATTACACCGGCCGAAGCTCTAGCGGCGCTCGGTGGTGCTACCGACACCGCCGGTGAAGCTGC
AGCGTGGACTCGTATTCCACGCACGCTACTGGCGCTCTGCGCGGGTGCGGCCCTCGCTACCTCAGGCACCGCTTTCCAGG
CTGTGACACGAAATCCACTGGCAGACCCTGGAATCTTCGGTGTTCTTGCGGGCGCGTCCCTCGCAGTGGTCATCAGCCTT
ACGTTCTTTAACGTCAGTCGCACGCTTCCGACCATGCTTATTGCGTCGGCGGGCGCTTTCGCTGCTGCGGTGTTTGTCTA
CAGCGTTGGCTCGATTGGTCGCGGCGGCGCCACACCGCTCAAGCTCGCGCTTTCCGGTGCTGCCACGGCTGCCGCTTTGT
CCAGCTTGACCAGCGCCATCCTGTTGCCCCGCGCCAATGTCATGGACGAGTTCCGCAATTGGCAGATTGGTTCTGTCAGT
GGTGCGCAGTGGGAATCGCTCGCGGTGGCGCTGCCGCTGCTTGGGCTCGGCTTCGCCATAGTGTTTCTCACCAGCAGTGG
CCTTAACGCCCTGTCCCTCGGCGATGATGTCGCCACCAGCTTGGGCATTAACCTCACTCGCACGCGGATCTTGGTCACGC
TCGGCGCAGTCTTGCTTTGCGGAACCGCCACGGCCGTCACCGGCCCGATTGCCTTCGTCGGGATAATCGTCCCGCACGTC
CTGCGCCTACTGCTCGGTACGGACCACCGCATCCTAATCCCAGCAAGTGCACTGGCAGGCGCCGTATTGCTGACACTCGC
AGACATCGCAGGACGCCTCCTTGGAGGCTCCTCCGAGATCGCCGTCGGCATTATCATGCCGTTCCTCGGCGCGCCACTGT
TCATCTGGATTGTGCGACAGACAAGGATGCGCGAACTATGA

Protein sequence : 
MFGVRSITPAEALAALGGATDTAGEAAAWTRIPRTLLALCAGAALATSGTAFQAVTRNPLADPGIFGVLAGASLAVVISL
TFFNVSRTLPTMLIASAGAFAAAVFVYSVGSIGRGGATPLKLALSGAATAAALSSLTSAILLPRANVMDEFRNWQIGSVS
GAQWESLAVALPLLGLGFAIVFLTSSGLNALSLGDDVATSLGINLTRTRILVTLGAVLLCGTATAVTGPIAFVGIIVPHV
LRLLLGTDHRILIPASALAGAVLLTLADIAGRLLGGSSEIAVGIIMPFLGAPLFIWIVRQTRMREL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 1e-35 48
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 1e-35 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
irp1B YP_005161192.1 Fe3+-siderophore ABC transporter permease VFG0926 Protein 7e-23 46