Gene Information

Name : spaA (CDBH8_1979)
Accession : YP_005161063.1
Strain : Corynebacterium diphtheriae BH8
Genome accession: NC_016800
Putative virulence/resistance : Virulence
Product : putative surface-anchored fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2068932 - 2070509 bp
Length : 1578 bp
Strand : -
Note : -

DNA sequence :
ATGACTGCACGGGGATGTCGTCTGGCGACGCTTGCAACGACTTTGACATTGTTTGTATCAAGCGCCACACTTACCTCAGT
GTTTGCTGTAGAGTCACGGTACCATGCAGCCCAACTAGGAGAGAGTCCTCCCAGCGTTGACCGCCTTAGTATCCCAGAAC
GTACGAGTATTACTGTGCACGCATTGATGGGACTGCCTACGGGACAGCCGGCTAATGGTACGAAGATCGATTCCAGCAAG
TTACCAGAAGTAGATGGTATTCCTTTTACTCTCTATCGAGTCAACAATATCGATCTAACTAAACAAGCGGGCTGGGATGC
GGCGTCGAAAATCAAGCTGGAAGAGCTCTATACAAACGGCCATCCAACCGACAAAGTAACCAAAGTCTCCACCAAGAAAA
CCGAAGGCGGCGTGGCCAAATTCGATAATCTCACACCAGCCCTCTACCTCGTCGTTCAAGAGCTCAACGGCACAGAGGCT
GTAGTGCGTTCGCAACCGTTCTTGGTGGCAGCGCCACAGACAAACCCTACTGGCAACGGCTGGCTCCAAGACGTGCACGT
ATACCCCAAGCACCAGGCTTTGTCTGCGCCGGTAAAAACTGCTGTGGATCCGGATGCCACGCAGCCAGGTTTCTCGGTGG
GGGAGAACGTGAAGTATCGCGTGGCTACCAAGATTCCAGAGATCGCCTCGAACACTAAGTTTGAGGGCTTCACCGTGGCG
GATAAACTCCCCGCTGAATTGGGTGAACCAGACACTAATAAAATAACGGTAACCCTTGGGGGAGATCCGATTAATTCTAC
CGACCTCTTGGTCCAAACCTATCAAGTCGGTGACCGCACCGTACTCAGCGTGCAACTAACTGGCGCAGCTCTGAGCACCT
TGGATCAGCATAAAAATGAAGAGCTCGTCGTTGAGTTCGAGGCACCAGTGACCAAGCAGCCAGAAAACGGCCAGCTAGAT
AACCAAGCGTGGGTGTTGCCGAGTAACCCCACTGCTCAGTGGGATCCAGAAGCGGACGGCGATCCTGCGATCCCCGGTGT
TGCGTCGTCACGCGTGAGTTCCAAGTACGGTCAGATCACTATTAATAAGGCCTTTGACGGCAGCACCCCGAGTGCCGATC
GCACCGCGACGTTCCAGCTACATCGTTGTAAGGAAGACGGCAACCTAGTCGAATCCGACGCCCCAATTTCTCTTGATGGC
AAGCAAGAGTTTGTTACCGATCAAGACGGTAAGGCCGTACTCAGCGGTATCCACTTGGGCACCTTGCAGCTGGAGTCCAA
TGTTATGAAATACACCGATGCGTGGGCCGGCAAGGGAACCGAATTCTGCCTAGTAGAAACAGCTACTGCCAGAGGATATG
AGCTGTTGCCTAAGCCAGTGATAGTAAAGCTGGAAGCCAACCAGTCGACCAACGTCCTAGTAAAGCAAGAAGTCAAGATA
ACCAACAAGAAAAAGAACGCCGGATTTGAACTGCCACTTACAGGTGGTTCGGGACGCATCGCCATCACTATCGGCATCGT
TGGTTTGCTCGTCGCCCTTGCAAGCTATGTCGTATCGCGTAGGAAGGACAACCGCTAG

Protein sequence :
MTARGCRLATLATTLTLFVSSATLTSVFAVESRYHAAQLGESPPSVDRLSIPERTSITVHALMGLPTGQPANGTKIDSSK
LPEVDGIPFTLYRVNNIDLTKQAGWDAASKIKLEELYTNGHPTDKVTKVSTKKTEGGVAKFDNLTPALYLVVQELNGTEA
VVRSQPFLVAAPQTNPTGNGWLQDVHVYPKHQALSAPVKTAVDPDATQPGFSVGENVKYRVATKIPEIASNTKFEGFTVA
DKLPAELGEPDTNKITVTLGGDPINSTDLLVQTYQVGDRTVLSVQLTGAALSTLDQHKNEELVVEFEAPVTKQPENGQLD
NQAWVLPSNPTAQWDPEADGDPAIPGVASSRVSSKYGQITINKAFDGSTPSADRTATFQLHRCKEDGNLVESDAPISLDG
KQEFVTDQDGKAVLSGIHLGTLQLESNVMKYTDAWAGKGTEFCLVETATARGYELLPKPVIVKLEANQSTNVLVKQEVKI
TNKKKNAGFELPLTGGSGRIAITIGIVGLLVALASYVVSRRKDNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP2013 NP_940344.1 surface-anchored fimbrial subunit Not tested Not named Protein 0.0 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaA YP_005161063.1 putative surface-anchored fimbrial subunit VFG2201 Protein 0.0 90