Gene Information

Name : spaC (CDBH8_1976)
Accession : YP_005161060.1
Strain : Corynebacterium diphtheriae BH8
Genome accession: NC_016800
Putative virulence/resistance : Virulence
Product : putative surface-anchored fimbrial subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2061851 - 2067451 bp
Length : 5601 bp
Strand : -
Note : Predicted outer membrane protein

DNA sequence :
GTGAGTAACCTACGTAACATCAAGAAACGAGCGTCTATCCCCGCAGCATTCGTTGCCGTTATCACCATGATTATGGGCGT
TGTTCTTGTGCCATTCAACACAGCACCCGCCGCAAACGCAGCGCCAGCAACAAAACAAGAGTTTGAAACCTGTGGTGGCT
CTGTCGCAATATCTTTTGACTTATCCAACTCGCTGAGCGCTTCAGACGTCGAACAGTCTAAAACAGCAGCGTTAGAGCTG
GTCAAGAGCTTAAAAGGCTCTCCTTATCGCTTTGGTATTTACACCTTCGCTTCGCACTCGCCAGCCGCTGGAAATAAGAA
TTTCACACCAGTAAGCCTGGCTAATGACGAGGGCTACAACGACGTTGTTGCCGCCATCGAAAATATTCAGATGCCAGCAA
TTCGAGAGGGGGACAAAGGTTCTCCTAACGGTGGTACTAACTGGGAAGGTGGCCTTCAAGCGATCGCGAATGATATGGAT
CGCGGAATTAAATACGACGCGGTGTACTTTATCACTGATGGTCAACCCACATGGGACAACAATGGCCGGAATTGGTTAGG
AAACACAACCGAAGTTGTTGAATTAGAAAAAGCTATTAGTCAAGCTAAGCGTATTTCTGATACAGGTGCCAAACTCATTC
CCGTTGGTATCGGGCAGCTTTCCCAAGACAAGCCAATCGAACTGTATAAGCCGATCAATCCTTCCAACTACTACTACCAC
TATTGGCAGGCTGACCCGTGGCAAGGGGCCTATTCCTTGACTGGCCAGCAAATGCTGGAAAAAATAACCTCGCCAGGGCT
GGCGCCAATAATTTTGCCAAATTATTCTGAATTGCCGGCACAGATGGGACAACAGATTTTTACTGGATGTTTCCAAATCG
CTAAGAACATTATTGATGCAGATGGGAATGTGGTAGAAAATCCAGCTGGCTGGAAATTCGATATCAAAGCACCACGGACG
CAAGGTATTCCTACCTCGGTAGTAACCGACAAAAATGGTCAAGATACCTTTGCCATGAAGTCGATTGACAAAGAAACTTT
TGAGATCACCATTACTGAACAGCCCGATGGAGATCAAAAAGAAAACTACCGGTTTAAAGATGCGCGGTGCCAGCGCTATG
TTTATGGGCAAGAACCTACTGATATTCCCGTAAAAACCAGTGGCACATCAATTACTTTGACTGCCGACACCAAGAGTTTG
ATTTCTTGCGGTTTTAACAACCTACCGGTAGTACCAATTTCGGTTTCGAAAAAAGTCAACGTAAATACTCCGCAGCTTTT
GGAAGAACTCAACAGCCAAACCTTTGATTTCACCTATAAATGTGAAAAAGGATTTAATGAAAAAGAAATCCAAGGGAAAA
TTGAGGGTGTTCGCAACGGAGAATCCAAAGAAATCGGAAAAGTAGCTCTTGGGACTCAATGCGAAGTCAAAGAGGTAACT
CCCAAAGTTGATGATTCTCGCATGAAGCTTTCTACTACTTGGAGTAGCGAGAATACCGCAGATGCCAAACAAGACAACGG
CACATATCGTTTTAAAGCGGGCATCGAGGCCTTCAAAAATAAGAAAACAGTTTTAGCCACAGCAGAGAATAACTATGAGG
CGCAACTTGCCACGATTAAGGTGACCAAGACGATCATCAACCGTGACAAAATTCCAGCAGCAAAACTGCCTCGAGAGTTT
CCTGTCACCTACACCTGTCGTTACTTACCACATCCTCATGCTCGTCCCGAACATGGTGGGCTCCCAGAAACCAATCCGTA
TTTTGTAGACTCCAAAACCGTTGTCGTTCCACGTGACGGAAGCGTTGAAATTGGCCCCTTCCCCGTGGGCACGCAGTGCA
GTTTTGAAGAAACCGCACGGCTTGATTCGAATGTTCAAGCAGACGCTAATATTCCTGGTTTTAGTTTGAAAACTGAGTGG
AATTCAAATATTTGTTTTGATAGAACAACAGATAATAATTCTTCAACATGTTCTACTAACGTGGTGTGGATTCCCAAAGC
CGGACACTATTCGCTCAACGTAGAAAACACGTATGAACGTGAGGTTGCGAGCCTAGCGCTTGAAAAAACCGTGAGTGGAG
ATGCTTCTGATCTGACAAATTCACATGAGTTTTCTTTTGACCTGCGGTGTGAAGATTTCGGGCAACAAGTCCATTCTCAT
AACAACATTGTGGTGAAAAAAGATGGACGGCAGGTTATCGAAGGTGTTCCGGTAGATGCAGACTGCACGTTGAGTGAGAA
ACAACCTGAACAAAAAGGTGTGGATTTTGTAATCCCCGAGCCAGTTCGTTTTCGTCCTACGACTGCCGGTGAGACCGTCA
AGATCGTTGTAGATAACACAGCAAAACGTCAATTAGCTCCAATTTCAGTCCAGAAAAAAGTCTTTAAAAAAGATACGTTT
TCTTCTGAAATTTCTGAAAAAATCGATGCACTAGATTACAACGTAGTAGCGGAATGTTCGGTCCCAGGTGAGCAATCGCC
TCGAAAAATCCAAAAAACCGTGCGTGACAATCACACCGCACACTTCGGAGAATTCCCAGTAGGAACCGCTTGTGCTTTTA
GTGAGCTCGTTAAAGCCCCAGAGGGAACCGAAATGAGTTACGAGTTTTCTGATGGGTCGGAGGTGACGATTGAAGATTCC
ACCCCCATAAATAAAGTGCTGACGAATACATTTGAAAATGCGCTTGGTGAGCTAAAAGTGTCCAAAAAAGTACTTGATAG
TGATGTACCCCAAGCAATAGCAGACCAAATTCCGTCGAACTTTACGGTCAACATCCGATGCTCGATCACTGGTGATCATT
CCATTACTTTGCAAAAAGATGAGCAAAAAGACGTATCCGAGGTAGTTGCAGGTGAGACATGCGTATTGAGTGAGGAGGTG
GGTCCTCTCACCGGTGCCACGCATCATAAACACTGGATCAAAGATGAACGGCATGAAGTTGCAGATTCTACAAACATCAC
GATTGACCCTAATGGTAGTAACGCAATTCGGTTGGAAAACCATTACGAAACCGATAATGTGCCTTTGGAAATCACGAAAA
ATGTTCGGATTATTGATCAAGTTGGAAATGAAGTAGCTAAAGAATTAAAAGATGCGATTGTTCAACCCAACCAACCATTC
TTATTCCGATACCGATGCGAAATTAACGGCAAAACAGTAGCAGAGGATACTTTAAGCGCAAATACGCTAAAGGTTGGCTC
GGTTAAGGTGCCTCGAGGGGCAACTTGTACGGTTGAAGAAGACGCCTCTTCAGTGGATGTGCCTAATGCAACGTTGTCGC
ATGTTGAATTCTTTGTTGGTGGAGTAAAAACGAATGACAAAGCGGTGATGACAATAAAATCAGACCGCAATCAGCTCGAA
GCCACCAATATTCTCACGTTGAAGACGGGGACATTTAACCTTAAAAAGAAGGTTGATGGTGAAGGTGTATCTACCATTCA
TGAGGATCGCCGCTTCGTTATCTCATATCAGTGCTCTTTAGGCGAGTGGAAGAAAGACGGTACGGTTACGCTGGGGCGTT
TTGATAGTGCTGAATGGCATCCTGTTAAAGATATCCCCGTGGGCGCAACGTGCAATATCATCGAAGATTCAGAAAAGGCC
CAAGAACCACATGCTCATGTGACGGCGCGTTGGTCTCATACAGACAGCACAAATGGTTGGGGTGATACTGAAGCAGCATG
TGAAAACCATTCATCATGTGAAGTAGACCCTAACAATGCATTTGCAACCACAGTGGTTATTACGGGAAATGAGAAAGAGA
ATTTCCAAGGTACCTTTGTCGTGTGGAACACCTACACCTATGACAAATCAAAGGTAGAAATCAACAAAGTGTTGACTGGG
GATGGTCCAGAACTTGCAAGTAAAGACGATTTTTCCTTCTCCCTAGTCTGCACTGATCCACGCTTTGCCGGAAGTGATTT
GGCAGATAAGAGTCACATTCCAGACCCCACGATTACGGTGGCGTTGAATGCTCGAGGTCAAAGTCGGGCTTCCTATCAAG
TTGCGGGCAAACAACACGATAGCGTTGAGGTTCCTGTTGGGTATGAGTGCGTTGTGACCGAGAATCCCATTGCACTTTAC
GACGCTACGGCAGCCACCCAGTTTAATGGCCCAGAAGTAGTGGAAAATACGGCCATGCAACGAACATCGGCAAACTCTGC
TTCTGCTCGTTTTACCACGGTGAAACAAAGTGACAACGGAGCTCAAAGTATCCAAGTGACCAATGATTACACCCGCCCAC
GTGCCAATGTTATGGTCCACAAAACGATAGCGAAGCCGAAGTATTCAGTGCACCCTTGGCTACTCAACGCTACATATCGC
ATCAACTATGTATGCCAAGATCCGCACATTGACGGTGTTACATACTCAGGAAACGTAGACATTGAAGCAGATGCAGCACA
ACCAACGGCGATTTTGGCTGATCCTGCCAATAAGATAAAAATTCCTGCTTCGGCAATATGTACTTTCAGTGAAGACACAG
AAGGACACCTGCCAGAAGATGCACAAGGCGCAGTGGATGAGACGAATAAAGTTGCGGAATTTTCCGGCGAGAAGGAAAAG
CGCTTCTATTTCACCCCAGAAATTAAAGACGTTGTCTTGTCTGAATCTGAGCCAACGCGAATTGAATTTACTAATTCTTA
TGTGGTGCCTCAACGGATTTTGAGCGTACAAAAATATGTAGAAGGCGATCCACACCATGCAATGATCGATCCAGAAGTAA
CATTTAGATTCGCGTACACGTGCACTATGCCGCACTTGCTTCCCACTCAACCCAATCCTATTTCGAAGGAGATAGGAAGC
AAGGTTGCAACCGGTGTCTTTGACATTCGAGAGGGCCAAGCATGGTTGTCGCCTGAAGTGCCCATCGGCACGTCTTGCAC
GATCAAAGAAGAAACAGATGCCACCTTGCATGCCAAGTTGGAAACTAACGCGCTGCGGATGGTGCCTACCTATTTGTTCC
CCACAGAACGTGCAGGTGGTTCTACTACGCCGGTAGCACCGAATATGACTGGACGTCCTGCCTACAACGGCACAGAGGCC
CGCCTCCAGATGCCAGAAGCAGGAATCGAGCTCAATGATGCCCACTCGCACACTGTGGTGATCAACAACGTGTATGCCAC
TGATGCTGAGATTAATATTGCCAAGGTGAACGCCGATAACTCTCCGTTGCCCGGCGCGCGCTTCGCCGTCTATGGGATAG
GAGAGAATGGCCAGCGTAAAGAGTCGGCTGAGGTTGCGGATGTGTCGGTGGAGCAGGCGTTGTTTGCGGTGCGCTTGCGC
CCTGGTAGTTACGAGTTGGTGGAGACTCAGGCTCCTCAGGGGGCGCAGTTGTTGCCTAAGCCGTGGCGTTTTGATGTCAA
GGCTGCGAATGCGGGTGCGATGGGTGATCTTGAGGTGACTTTGGATCACTATGATGCTGATTCGGGTTTGATCTCGGTGG
AGCACCCGCAGGGTAAGCCGTGGTTGATCAAGGTGGCTAATGTGTCGGCATCCACACTGCCGTTGACTGGTTCGAATGGG
TATGTGCGGTGGCTGTTGGCCGGTGCTGCGGGCCTGTTGGTGGCTGCAGCATTGTGGTTAGTGGCGCGTCGTAAGCGTTA
G

Protein sequence :
MSNLRNIKKRASIPAAFVAVITMIMGVVLVPFNTAPAANAAPATKQEFETCGGSVAISFDLSNSLSASDVEQSKTAALEL
VKSLKGSPYRFGIYTFASHSPAAGNKNFTPVSLANDEGYNDVVAAIENIQMPAIREGDKGSPNGGTNWEGGLQAIANDMD
RGIKYDAVYFITDGQPTWDNNGRNWLGNTTEVVELEKAISQAKRISDTGAKLIPVGIGQLSQDKPIELYKPINPSNYYYH
YWQADPWQGAYSLTGQQMLEKITSPGLAPIILPNYSELPAQMGQQIFTGCFQIAKNIIDADGNVVENPAGWKFDIKAPRT
QGIPTSVVTDKNGQDTFAMKSIDKETFEITITEQPDGDQKENYRFKDARCQRYVYGQEPTDIPVKTSGTSITLTADTKSL
ISCGFNNLPVVPISVSKKVNVNTPQLLEELNSQTFDFTYKCEKGFNEKEIQGKIEGVRNGESKEIGKVALGTQCEVKEVT
PKVDDSRMKLSTTWSSENTADAKQDNGTYRFKAGIEAFKNKKTVLATAENNYEAQLATIKVTKTIINRDKIPAAKLPREF
PVTYTCRYLPHPHARPEHGGLPETNPYFVDSKTVVVPRDGSVEIGPFPVGTQCSFEETARLDSNVQADANIPGFSLKTEW
NSNICFDRTTDNNSSTCSTNVVWIPKAGHYSLNVENTYEREVASLALEKTVSGDASDLTNSHEFSFDLRCEDFGQQVHSH
NNIVVKKDGRQVIEGVPVDADCTLSEKQPEQKGVDFVIPEPVRFRPTTAGETVKIVVDNTAKRQLAPISVQKKVFKKDTF
SSEISEKIDALDYNVVAECSVPGEQSPRKIQKTVRDNHTAHFGEFPVGTACAFSELVKAPEGTEMSYEFSDGSEVTIEDS
TPINKVLTNTFENALGELKVSKKVLDSDVPQAIADQIPSNFTVNIRCSITGDHSITLQKDEQKDVSEVVAGETCVLSEEV
GPLTGATHHKHWIKDERHEVADSTNITIDPNGSNAIRLENHYETDNVPLEITKNVRIIDQVGNEVAKELKDAIVQPNQPF
LFRYRCEINGKTVAEDTLSANTLKVGSVKVPRGATCTVEEDASSVDVPNATLSHVEFFVGGVKTNDKAVMTIKSDRNQLE
ATNILTLKTGTFNLKKKVDGEGVSTIHEDRRFVISYQCSLGEWKKDGTVTLGRFDSAEWHPVKDIPVGATCNIIEDSEKA
QEPHAHVTARWSHTDSTNGWGDTEAACENHSSCEVDPNNAFATTVVITGNEKENFQGTFVVWNTYTYDKSKVEINKVLTG
DGPELASKDDFSFSLVCTDPRFAGSDLADKSHIPDPTITVALNARGQSRASYQVAGKQHDSVEVPVGYECVVTENPIALY
DATAATQFNGPEVVENTAMQRTSANSASARFTTVKQSDNGAQSIQVTNDYTRPRANVMVHKTIAKPKYSVHPWLLNATYR
INYVCQDPHIDGVTYSGNVDIEADAAQPTAILADPANKIKIPASAICTFSEDTEGHLPEDAQGAVDETNKVAEFSGEKEK
RFYFTPEIKDVVLSESEPTRIEFTNSYVVPQRILSVQKYVEGDPHHAMIDPEVTFRFAYTCTMPHLLPTQPNPISKEIGS
KVATGVFDIREGQAWLSPEVPIGTSCTIKEETDATLHAKLETNALRMVPTYLFPTERAGGSTTPVAPNMTGRPAYNGTEA
RLQMPEAGIELNDAHSHTVVINNVYATDAEINIAKVNADNSPLPGARFAVYGIGENGQRKESAEVADVSVEQALFAVRLR
PGSYELVETQAPQGAQLLPKPWRFDVKAANAGAMGDLEVTLDHYDADSGLISVEHPQGKPWLIKVANVSASTLPLTGSNG
YVRWLLAGAAGLLVAAALWLVARRKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP2010 NP_940341.1 surface-anchored membrane protein Not tested Not named Protein 0.0 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaC YP_005161060.1 putative surface-anchored fimbrial subunit VFG2199 Protein 0.0 81