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Name : clpC (CDBH8_1937) Accession : YP_005161021.1 Strain : Corynebacterium diphtheriae BH8 Genome accession: NC_016800 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 2018978 - 2021611 bp Length : 2634 bp Strand : - Note : - DNA sequence : ATGTTCGAGCGGTTTACCGATCGTGCACGTCGCGTTATCGTTCTGGCACAGGAAGAAGCGCGCGGCCTCAATCACAATTA CATCGGCACCGAGCACATCCTGCTCGGACTTATTCACGAGGGCGAGGGCGTGGCCGCTAAGGCGCTCGAGTCCATGGGCA TCTCCCTTGAAGCAGTACGCCAAGAGGTAGAAGAAATCATCGGCCACGGCTCCGAGCCACCAGCTGGCCACATTCCTTTT ACTCCACGTGCCAAGAAGGTACTTGAGCTCTCCTTGCGTGAGGGTCTGCAGATGGGACATAAGTACATCGGTACTGAGTT CCTGCTGCTCGGCCTTATCCGTGAAGGCGACGGCGTAGCCGCACAAGTTTTGGTCAAGCTCGGCGCTGACCTGCCCCGTG TACGCCAGCAGGTTATCCAGCTTCTTTCCGGCTACGAGGGTGGCGAAAGCCCAGAAAACAATAACGAGGGCGAGGCTGTG GGTGCTGGTACTGGCGCTGGCCGCGCTGGCCGCGGTGGTGGCGCAGGCGAGCGCTCCAACTCCTTGGTTTTGGACCAGTT TGGTCGCAACCTCACCCAGGCTGCTAAGGAAGGCAAGCTGGATCCTGTGGTGGGTCGTGAGCAGGAAATTGAGCGCATCA TGCAGGTGCTCTCACGTCGTACCAAGAACAACCCAGTTCTTATCGGAGAGCCAGGTGTTGGTAAGACCGCTGTTGTAGAA GGCCTAGCTCTAGACATCGTTAATGGCAAGGTGCCAGAAACGCTGAAAGACAAGCAGGTTTACTCTCTTGACCTCGGCTC CTTGGTGGCAGGTTCGCGCTACCGTGGTGACTTCGAAGAGCGCCTGAAGAAGGTTCTCAAGGAGATCAACCAGCGTGGCG ACATCATCTTGTTCATCGATGAGATCCACACCCTCGTCGGTGCCGGTGCCGCAGAAGGCGCTATCGACGCTGCCAGCTTG CTCAAACCAAAACTGGCTCGTGGTGAGCTACAGACCATCGGTGCTACCACTTTGGACGAGTACCGCAAGCACATCGAAAA GGACGCCGCACTTGAGCGTCGTTTCCAGCCAGTGCAGGTTCCAGAGCCTTCCGTCGATATGACCATCGAGATCCTCAAGG GTCTACGTGACCGCTACGAGGCACACCACCGCGTCTCCATCACCGATGGGGCTCTCGCAGCAGCAGCACAGCTGTCCGAT CGCTACATCAACGATCGCTTCTTGCCAGATAAGGCCGTTGACCTTATCGACGAAGCCGGCGCACGCATGCGTATCAAGCG CATGACCGCACCGGAATCCATCCGCAAGGTAGACGATCAGATCGCGGAAGTCCGTCGTGAGAAGGAAGCCGCAATCGACG CCCAAGACTTTGAAAAGGCCGCAGGCCTGCGCGACACCGAGCGCAAGTTAGGCGAAGAGCGCGCTGAGAAAGAAAAGCAG TGGCGCTCCGGCAGCCTAGAAGACATCGCAGAAGTCGGCGAAGAGCAAATCGCTGAGGTGCTGGGCAACTGGACTGGCAT CCCAGTGTTCAAGCTGACCGAGGAAGAATCCTCCCGTCTGCTGCACATGGAAGAGGAGCTACACAAGCGCATCATCGGCC AAGACGATGCCGTCAAGAGTGTTTCTCGCGCCATCCGCCGCACCCGCGCTGGCCTCAAGGACCCACGCCGTCCTTCCGGC TCCTTCATCTTCGCCGGCCCATCTGGTGTGGGTAAGACCGAGCTATCCAAGTCACTGGCCAACTTCCTGTTCGGCGACGA CGACGCCTTGATCCAGATCGACATGGGCGAGTTCCACGACCGCTTCACTGCGTCCCGTCTGTTCGGTGCCCCTCCTGGAT ATGTGGGCTACGACGAAGGCGGTCAGCTCACCGAAAAGGTCCGCCGCAAGCCATTCTCCGTCGTGCTTTTCGACGAAATC GAAAAGGCGCACAAGGAGATCTACAACACCTTGCTGCAGGTCCTCGAAGAAGGTCGCCTCACCGACGGCCAAGGCCGTGT GGTGGACTTCAAGAACACCGTGCTGATCTTCACCTCCAACCTGGGTACCCAAGACATCTCTAAGGCTGTGGGCATGGGCT TTAGCTCTGTCGGCGAGCACGATGCCGACGGTCAGTACGACCGCATGAAGCAGAAGGTCAACGACGAGCTGAAGAAGCAC TTCCGCCCTGAGTTCCTCAACCGTATCGACGAAATCGTGGTATTCCACCAGCTCACCCAAGAGCAGATCGTCGAAATGGT GGACCTGCTCATCGGACGCGTATCCAAGGCACTTGCTCAAAAAGACATGGGCATCGAGCTCACCGAAAAGGCCAAGAACC TGCTGGCAAAGCGTGGATTCGATCCAGTACTGGGTGCACGACCATTGCGTCGCACCATCCAGCGCGAGATCGAAGACGTA CTCTCCGAGAAGATCCTCTTCGGTGAGGTCGGCGCTGGTGAGATCGTCACCGTGGATGTTGAAGGCTGGGACGGCGAATC CAAGGAAACCGACAAGGCTTCCTTCACCTTCACCCCACGCGTGAAGCCGCTGCCAGACGAGTTCGAAGAGGCAACCCCAT CTGAGGAAGCTCAAGAAGCAGTGATTAACGCTGCTGAGACTGAGGTTCCAGAAGAAGCCAACATCGAAAACTAA Protein sequence : MFERFTDRARRVIVLAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGSEPPAGHIPF TPRAKKVLELSLREGLQMGHKYIGTEFLLLGLIREGDGVAAQVLVKLGADLPRVRQQVIQLLSGYEGGESPENNNEGEAV GAGTGAGRAGRGGGAGERSNSLVLDQFGRNLTQAAKEGKLDPVVGREQEIERIMQVLSRRTKNNPVLIGEPGVGKTAVVE GLALDIVNGKVPETLKDKQVYSLDLGSLVAGSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASL LKPKLARGELQTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTIEILKGLRDRYEAHHRVSITDGALAAAAQLSD RYINDRFLPDKAVDLIDEAGARMRIKRMTAPESIRKVDDQIAEVRREKEAAIDAQDFEKAAGLRDTERKLGEERAEKEKQ WRSGSLEDIAEVGEEQIAEVLGNWTGIPVFKLTEEESSRLLHMEEELHKRIIGQDDAVKSVSRAIRRTRAGLKDPRRPSG SFIFAGPSGVGKTELSKSLANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYDEGGQLTEKVRRKPFSVVLFDEI EKAHKEIYNTLLQVLEEGRLTDGQGRVVDFKNTVLIFTSNLGTQDISKAVGMGFSSVGEHDADGQYDRMKQKVNDELKKH FRPEFLNRIDEIVVFHQLTQEQIVEMVDLLIGRVSKALAQKDMGIELTEKAKNLLAKRGFDPVLGARPLRRTIQREIEDV LSEKILFGEVGAGEIVTVDVEGWDGESKETDKASFTFTPRVKPLPDEFEEATPSEEAQEAVINAAETEVPEEANIEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 99 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-98 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005161021.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 58 |
| clpC | YP_005161021.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 1e-150 | 50 |
| clpC | YP_005161021.1 | ATP-dependent Clp protease ATP-binding subunit | VFG2084 | Protein | 3e-97 | 41 |
