Gene Information

Name : BSVBI22_A0608 (BSVBI22_A0608)
Accession : YP_005154298.1
Strain :
Genome accession: NC_016797
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 601586 - 602293 bp
Length : 708 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGAAAATTCTCGTTATCGAAGATGACCGCGAAGCGGCCCGTTATCTGGAAAAGGCCTTTGCCGAGGCAGGGCATTCGGC
CGATATCGCGGGCGACGGCGAAACCGGCTACGCACTTGCCGAAAACGGCAATTACGATGTGCTGGTGGTGGACCGTATGC
TGCCCAAACGCGACGGCCTTTCCGTTGTGGCGGGCCTGCGCGCCAAGGGCATGGAAACGCCGGTCCTGATCCTGTCGGCG
CTTGGCGAGGTGGATGACCGCGTGACCGGCCTGCGCGCTGGGGGCGATGATTATCTCACCAAGCCCTATGCTTTTTCCGA
ACTTCTGGCGCGTGTCGAGGTCTTGCAGCGCCGCTCAAGCCCGCGCGAGGCGGATACGATCTACCGCGTCGGCGATCTGG
AGCTTGACCGCCTTGCGCATACTGCGCGCCGCCAGAGTGTTGATATTACGCTTCAACCGCGAGAATTTCGTCTTCTCGAA
TATCTCATGCGCCATGCCGGGCAGGTCGTCACCCGCACCATGCTGCTTGAAAACGTCTGGGATTACCACTTCGACCCGCA
GACCAATGTGATCGATGTTCACATTTCGCGGCTGCGCTCCAAGATTGAAAAGGGCTTTGACGAGCCGCTGCTTCATACGG
TGCGCGGGGCTGGCTATATGCTGAAGGCGGGCCGGGGCAAGCAATCCGCTGCCGCAAGGGCGGAATGA

Protein sequence : 
MKILVIEDDREAARYLEKAFAEAGHSADIAGDGETGYALAENGNYDVLVVDRMLPKRDGLSVVAGLRAKGMETPVLILSA
LGEVDDRVTGLRAGGDDYLTKPYAFSELLARVEVLQRRSSPREADTIYRVGDLELDRLAHTARRQSVDITLQPREFRLLE
YLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIEKGFDEPLLHTVRGAGYMLKAGRGKQSAAARAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BSVBI22_A0608 YP_005154298.1 DNA-binding response regulator BAC0125 Protein 2e-51 48
BSVBI22_A0608 YP_005154298.1 DNA-binding response regulator BAC0083 Protein 1e-46 48
BSVBI22_A0608 YP_005154298.1 DNA-binding response regulator BAC0197 Protein 2e-45 47
BSVBI22_A0608 YP_005154298.1 DNA-binding response regulator BAC0111 Protein 1e-54 45
BSVBI22_A0608 YP_005154298.1 DNA-binding response regulator BAC0347 Protein 7e-48 45
BSVBI22_A0608 YP_005154298.1 DNA-binding response regulator BAC0308 Protein 2e-46 44
BSVBI22_A0608 YP_005154298.1 DNA-binding response regulator BAC0638 Protein 5e-38 44
BSVBI22_A0608 YP_005154298.1 DNA-binding response regulator NC_002516.2.879194.p Protein 7e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BSVBI22_A0608 YP_005154298.1 DNA-binding response regulator VFG1389 Protein 4e-36 45
BSVBI22_A0608 YP_005154298.1 DNA-binding response regulator VFG0596 Protein 2e-38 41
BSVBI22_A0608 YP_005154298.1 DNA-binding response regulator VFG1390 Protein 1e-38 41