Gene Information

Name : Clo1100_0507 (Clo1100_0507)
Accession : YP_005146593.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 577825 - 578589 bp
Length : 765 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGACTATTATACAAACACAGGATCTTAAAAAGGATTACGGTTCGAAAGGAATGAAGTTTCAAGCACTCAACGGCATAAA
TCTCGAGGTTGAAAAAGGTGAATTTCTAGCAATAATGGGGCCCTCCGGCTCAGGAAAAACCACTCTTCTAAATTTGCTCT
CAACAATTGACAAGCCCACATCCGGCAAGGTTATATTTGAAGGAACAGATCTATTTAAAATAAAAAGTGAAGAACTGGCA
CGTTTTAGAAGGGATAAAATAGGCTTTGTATTTCAGGATTTCAATCTTCTGGATAACATGACTGTAATGGATAATATTGC
ACTCCCTCTTGCCTTGAACCGGGTTCATCATAAGAAAATAATCTCAAAGGTAAAAGAATTAGCTGCTTTCTTCGATATTG
AAGAACAATTGCCGAAACGCCCATATCAGCTTTCGGGAGGACAAAAACAGAGGGCTGCTGCCGCAAGGGCATTGATTATG
AATCCTTCAGTAATTTTTGCCGATGAGCCTACAGGTGCTCTGGATTCCAAATCGTCTGCGGGAATACTCGAATGTTTCAG
AAGACTCAACGAGGAATATGGGACGACTATCATAATGGTTACACATGATGCTTTTGCAGCCAGCTATTGCAGCAGGATTA
TGTTTTTAAAGGATGGGGCCATTCATGCCAGAATCGATAAAACAAGGGACAGAAAGGAATTATTCCATCAGATTCTTGAC
ATGCTTGGAGCTATGGGAGGTGCAAATTCAAATGAACTCCTTTAG

Protein sequence :
MTIIQTQDLKKDYGSKGMKFQALNGINLEVEKGEFLAIMGPSGSGKTTLLNLLSTIDKPTSGKVIFEGTDLFKIKSEELA
RFRRDKIGFVFQDFNLLDNMTVMDNIALPLALNRVHHKKIISKVKELAAFFDIEEQLPKRPYQLSGGQKQRAAAARALIM
NPSVIFADEPTGALDSKSSAGILECFRRLNEEYGTTIIMVTHDAFAASYCSRIMFLKDGAIHARIDKTRDRKELFHQILD
MLGAMGGANSNELL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-28 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1100_0507 YP_005146593.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 7e-35 44
Clo1100_0507 YP_005146593.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 1e-38 43
Clo1100_0507 YP_005146593.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 3e-35 43
Clo1100_0507 YP_005146593.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-31 42