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Name : Clo1100_3990 (Clo1100_3990) Accession : YP_005149903.1 Strain : Clostridium sp. BNL1100 Genome accession: NC_016791 Putative virulence/resistance : Resistance Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Function : - COG functional category : - COG ID : - EC number : - Position : 4462223 - 4462921 bp Length : 699 bp Strand : - Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal DNA sequence : TTGAGCAAAAAGATCTTAATTGTAGACGATGAGAAAAATATTGTCGACATATTGAAATTCAACCTAAAGAAGGAAGGCTA TGATACAATAGAGGCTTATGACGGGGAGGAAGCAGTTAACCTCGCACTTTCCCAGAATCCGGATCTCATTTTGCTGGATA TAATGCTTCCGAAAATGGATGGGTTCACTGTATGCAGAAAATTAAGACAATCTATTTCAACACCTATTCTTATGCTGACT GCAAAGGAAGAGGAAGTGGACAAAGTTCTGGGTCTTGAGCTGGGAGCAGATGATTATATAACAAAGCCATTTAGCCCAAG AGAACTTATGGCACGGGTTAAGGCAAACCTCAGAAGGCTGATACCCGGTGAGCAGTCAGGTGAGGATACTAATTCACACA TAAACAAGTATGGAGATTTAACTATTGATATAGACAGGTATGAAATTAAGAGGGGAGAAGAAACCATAGAGCTTACTCTC CGTGAGTTTGAACTGGTAAAATTCCTCGCAGCGCAGCAAGGAACCATTTTTTCAAGAGAAACTCTTCTGGAAAAGGTTTG GGGCTATGAATACTACGGGGATGTAAGAACTGTTGACGTTACAGTCAGAAGAGTAAGGGAAAAACTCGAGCAGGATCCTG CAAATCCACAGTACATTGTTACTAAAAGAGGAGTCGGATACTATTTCAATAAAATTTAG Protein sequence : MSKKILIVDDEKNIVDILKFNLKKEGYDTIEAYDGEEAVNLALSQNPDLILLDIMLPKMDGFTVCRKLRQSISTPILMLT AKEEEVDKVLGLELGADDYITKPFSPRELMARVKANLRRLIPGEQSGEDTNSHINKYGDLTIDIDRYEIKRGEETIELTL REFELVKFLAAQQGTIFSRETLLEKVWGYEYYGDVRTVDVTVRRVREKLEQDPANPQYIVTKRGVGYYFNKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 1e-33 | 41 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 2e-33 | 41 |
| nisR2 | YP_006309922.1 | NisR | Not tested | FWisland_1 | Protein | 7e-22 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_012469.1.7685629. | Protein | 3e-54 | 57 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | HE999704.1.gene2815. | Protein | 5e-50 | 53 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_003923.1003749.p0 | Protein | 2e-48 | 51 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002758.1121668.p0 | Protein | 2e-48 | 51 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_009641.5332272.p0 | Protein | 2e-48 | 51 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_013450.8614421.p0 | Protein | 2e-48 | 51 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_007793.3914279.p0 | Protein | 2e-48 | 51 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002745.1124361.p0 | Protein | 2e-48 | 51 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_009782.5559369.p0 | Protein | 2e-48 | 51 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002951.3237708.p0 | Protein | 2e-48 | 51 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002952.2859905.p0 | Protein | 3e-48 | 50 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_007622.3794472.p0 | Protein | 3e-48 | 50 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AE016830.1.gene1681. | Protein | 1e-46 | 49 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_012469.1.7686381. | Protein | 4e-47 | 48 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AE000516.2.gene3505. | Protein | 2e-38 | 46 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | HE999704.1.gene1528. | Protein | 1e-35 | 45 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AF155139.2.orf0.gene | Protein | 1e-39 | 45 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AM180355.1.gene1830. | Protein | 6e-38 | 44 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | FJ349556.1.orf0.gene | Protein | 1e-39 | 44 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002695.1.915041.p | Protein | 2e-26 | 44 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | CP000034.1.gene3834. | Protein | 2e-26 | 44 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | CP001918.1.gene5135. | Protein | 4e-22 | 44 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | CP004022.1.gene1676. | Protein | 4e-29 | 44 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_014475.1.orf0.gen | Protein | 7e-37 | 43 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_005054.2598277.p0 | Protein | 7e-37 | 43 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_013450.8614146.p0 | Protein | 1e-33 | 43 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002951.3238224.p0 | Protein | 1e-33 | 43 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_007793.3914065.p0 | Protein | 1e-33 | 43 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002758.1121390.p0 | Protein | 1e-33 | 43 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_010079.5776364.p0 | Protein | 1e-33 | 43 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002952.2859858.p0 | Protein | 1e-33 | 43 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_007622.3794948.p0 | Protein | 1e-33 | 43 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_003923.1003417.p0 | Protein | 1e-33 | 43 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | CP000647.1.gene4257. | Protein | 2e-26 | 43 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | CP001138.1.gene4273. | Protein | 2e-26 | 43 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | BAC0533 | Protein | 2e-26 | 43 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AF130997.1.orf0.gene | Protein | 4e-36 | 42 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | DQ212986.1.gene4.p01 | Protein | 1e-37 | 42 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AF162694.1.orf4.gene | Protein | 4e-33 | 41 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | CP004022.1.gene3215. | Protein | 8e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | VFG1563 | Protein | 6e-34 | 41 |
| Clo1100_3990 | YP_005149903.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | VFG1702 | Protein | 7e-34 | 41 |
