Gene Information

Name : Clo1100_3925 (Clo1100_3925)
Accession : YP_005149841.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4399066 - 4401126 bp
Length : 2061 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC

DNA sequence :
ATGAATGAGAATTTAAAAAAGAAAAAAAGTTGGATAACTAAGGACATTTTAAAAAATGCAGTAAAGGATTCATTTAAAAA
GCTTAATCCTAAAGATATGGTAAAAAACCCGGTCATGTTTGTAGTAGAAGTTGGATTTATTATTACTTTGGTTCTGACTG
TCTTTCCAAACCTACTTGAGAAAAATGGAAATTCCTTGTATAACGGAATAGTTTCTGGAATCTTATTTATAACCCTGCTT
TTTGCTAACTTTGCCGAGGCGGTTGCCGAGGGCAGAGGGAAAGCTCAGGCTGATAGTATGAAGAAAACTAAGAAGGATAC
CAAAGCAAAGCTTGTAGACAAAAGCGGCAGCATTAAAATTTTAAGCTCCAATGAAATAAAAAAAGGAGATATCGTTTTAT
GCGAACCCGGGGATATCATTCCAAATGACGGTGAGGTTGTGGAAGGCCTAGCATTCGTTGATGAATCGGCCATTACAGGG
GAATCTGCTCCCGTTCTTAAGGAAGCAGGAGGCGACTTTAGCTCTGTAACAGGCGGAACTAAAGTAACCAGCGACTGGCT
TAAAATCAAAATAACAGCGACCCCCGGAGAATCCTTTCTTGATAAGATGATTAGCCTTGTAGAAGGTGCTTCAAGGCAGA
AGACGCCCAACGAAATAGCCTTATCAACAATTCTAATAAGCCTTACCGTAATTTTTTTGATTGTAGTTATAACACTCTAC
CCAATGGCTCATTATGCGGGTGTAACAATCTCCGTTTCGTCTCTAATTGCCTTGCTTGTCTGCCTGATACCTACCACCAT
AGGAGGTCTTTTATCAGCCATTGGCATTGCCGGCATGGACAGGGTAACACGTTTCAACGTTATTGCTATGTCAGGAAAAG
CCGTTGAAGCCTGTGGAGACGTGGACACAATGATACTCGATAAAACCGGAACTATTACCTATGGAAACAGGCTGGCGGCG
GAGTTTATTCCTGTAGGCAAGTTCACCCAGGAAAACATTGCAAGGTTTGCTGTAATTGCCTCCTTGAAGGATGACACTCC
GGAAGGCCGTTCTGTTGTTGAATTGGCAGCTAAACAGGGAATCAATATTGACAAATCAGAGTACGATAAAGCCGAAAATA
TAGAATTTACAAGTCAGACACGGATGAGTGGTCTAAATCTGCCCAATGGAACCCCGGTAAGAAAAGGTGCTTCAGATACT
ATCCAGAAGTACATTTCGGAGCTTGGAGGAACTGTGCCTGAGGACCTTCAGCCAAACGTTGATAAAATTTCAAAACTTGG
GGGAACTCCTCTTGTTGTATGTGTTGACAAGGAGATAATAGGAGTCATATACCTGAAAGATACTGTTAAGCCCGGCCTTG
TTGACAGGTTCCAGCGTTTGCGTCAAATCGGGATAAAAACAATTATGTGTACCGGGGATAATCCCCTTACTGCGGAAACA
ATTGCAAAAGAAGCCGGAGTTGATGACTTTATAGCAGAATGTAAGCCGGAGGACAAAATAGACGTAATTAAGCGTGAGCA
GGCTCTGGGAAGGCTTGTGGCAATGACCGGTGACGGAACAAACGATGCCCCTGCTCTGGCACAGGCTGATGTTGGTCTTG
CCATGAACAGCGGTACTGTAGCCGCAAAGGAAGCCGCCAACATGGTGGACCTGGATTCTGACCCCACAAAGATTATTGAA
GTTGTGGAAATCGGGAAGCAACTCCTTATTACCCGCGGTTCATTAACAACCTTCAGCATTGCAAATGATGTTGCAAAATA
TTTTGCAATTATTCCGGCTATGTTTACATTATCAATACCACAAATGAGAGTATTGAATGTAATGGGGCTTTCCACTCCCA
ATAGTGCAATTCTGTCGGCACTGATATTTAATGCCGTTATTATACCTGCACTAATTCCTATCGCCATGAGGGGTGTTAAA
TATAAGCCTATGAGTGCTGAAGCTATGCTTGCTAAAAATATGCTGATTTACGGATTAGGCGGGATGGCAGTACCCTTTAT
AGGAATTAAATTGATAGATGTTTTAATAAGTCCTATTCTGAAAGCTTTAAATTTGGGTTAA

Protein sequence :
MNENLKKKKSWITKDILKNAVKDSFKKLNPKDMVKNPVMFVVEVGFIITLVLTVFPNLLEKNGNSLYNGIVSGILFITLL
FANFAEAVAEGRGKAQADSMKKTKKDTKAKLVDKSGSIKILSSNEIKKGDIVLCEPGDIIPNDGEVVEGLAFVDESAITG
ESAPVLKEAGGDFSSVTGGTKVTSDWLKIKITATPGESFLDKMISLVEGASRQKTPNEIALSTILISLTVIFLIVVITLY
PMAHYAGVTISVSSLIALLVCLIPTTIGGLLSAIGIAGMDRVTRFNVIAMSGKAVEACGDVDTMILDKTGTITYGNRLAA
EFIPVGKFTQENIARFAVIASLKDDTPEGRSVVELAAKQGINIDKSEYDKAENIEFTSQTRMSGLNLPNGTPVRKGASDT
IQKYISELGGTVPEDLQPNVDKISKLGGTPLVVCVDKEIIGVIYLKDTVKPGLVDRFQRLRQIGIKTIMCTGDNPLTAET
IAKEAGVDDFIAECKPEDKIDVIKREQALGRLVAMTGDGTNDAPALAQADVGLAMNSGTVAAKEAANMVDLDSDPTKIIE
VVEIGKQLLITRGSLTTFSIANDVAKYFAIIPAMFTLSIPQMRVLNVMGLSTPNSAILSALIFNAVIIPALIPIAMRGVK
YKPMSAEAMLAKNMLIYGLGGMAVPFIGIKLIDVLISPILKALNLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 0.0 63
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 0.0 63
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 0.0 63
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 0.0 63
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 0.0 63
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 0.0 63
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-154 57
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-154 57