Gene Information

Name : Clo1100_3808 (Clo1100_3808)
Accession : YP_005149726.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Unknown
Product : single stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4271006 - 4271377 bp
Length : 372 bp
Strand : -
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence :
ATGAATAATGTCAGTCTTGTAGGTAGGTTAACAAAAGATGTTGATCTGAGGTACACAACCAAAAAAATGAGAGCGGTGGG
ATCATTTACATTGGCCGTAGATAGAGACCCCAGAAAGGTAACAAATGATAAAACGGCAGATTTTATACCGGTTGTTACAT
GGGGAAAAACCGCAGAGTTTGCAAGCAAATACTTTTCAAAGGGCCATCGTATAGCCCTTCAGGGAAGCATACATACCAGA
GTTTGGGAGGATGAAGAAAAAAACAGGCACTATGTTACGGAAGTTGTTGCAGACAGGGTGTTTTTTGCCGACGCTAAGCA
AAGAGAGTTCGATGAACCGGAAATAGAAGATTTGGAAGAAGGGGCTCTTTGA

Protein sequence :
MNNVSLVGRLTKDVDLRYTTKKMRAVGSFTLAVDRDPRKVTNDKTADFIPVVTWGKTAEFASKYFSKGHRIALQGSIHTR
VWEDEEKNRHYVTEVVADRVFFADAKQREFDEPEIEDLEEGAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-14 48
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-15 47
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-15 46
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-15 45
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-14 44
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 4e-15 43
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 1e-12 42