Gene Information

Name : Clo1100_3564 (Clo1100_3564)
Accession : YP_005149494.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Unknown
Product : DNA polymerase I family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4039967 - 4041955 bp
Length : 1989 bp
Strand : -
Note : PFAM: DNA polymerase family A

DNA sequence :
ATGAAGAACTTGGAAATCGATATTGAATCCTACTCATCTGTTAATCTACAAAAGAGCGGAGTTTATCGTTATGTGGAGGC
AGATGATTTTGAAATATTACTGTTCGGATATTCAATTGACGGTGGAGAGGTTATGGTGGTTGACCTTGTGAGTGGAGAAA
AAATACCGAAAGAAATACTCGATGCCTTAACCGATGAAGAAGTAACCAAGTGGGCATTCAATGCTCAATTTGAGCGTATC
TGCCTATCAAGGTATTTATCCGATTTAGGGATAAACCTTGACCCATTTCACGACAACCATCCACTATCAAAAGAACTAGC
AAGATATCTAAACCCTGCATCCTGGAAATGTTCTATGGTGTGGTCTGCTTATATGGGACTCCCCCTTTCTTTGGAAGGTG
TGGGTGCTGTTCTTGGCCTTGAAAAGCAAAAGTTGACCGAAGGCAAAGACCTTATAAGATACTTTTGTGTTCCGTGTACT
CCTACTAAATCAAACAGTGGCAGAACTCGTAATCTGCCAAGTAATGATGAGGAGAAATGGCAGAGGTTTAAGGATTATAA
CAAGCGTGACGTTGAAACAGAAATCCAGATACAACAAAGGCTTATAAAGTTTCCTGTGCCAGAAGATATATGGGATGAAT
ACCATCTTGACCAGGAAATCAATGATCGTGGCATAAGGGTGGATATGGATTTTGTAAAACAGGCTATTGCTATGGATGAG
ATTTCTCATGAAAAACTGATGTCAGCAATGCAGCAATTAACAGAACTTGATAATCCCAACTCGGTACAACAGATGAAAGG
CTGGCTTTCCGATAACGGGCTAGAAACAGATACACTTGGTAAAAAAGCTGTGGCAGAGTTATTGAAGGATGCACCGGAGC
CTTTGGCTGAAGTTCTTAAGCTCCGTCAGCAACTTGCAAAATCATCTGTAAAAAAATATACGGCAATGGAAAATGCTATT
TGTGCAGATTCTCGTGCCAGAGGTATGTTCCAGTTTTACGGTGCAAACAGAACTGGCCGCTTTGCAGGAAGGCTTGTGCA
ATTACAGAACCTGCCACAAAATCATATGCCGGATTTAAAAGAGGCACGCAGTATAGTAAAAAGCGGTGATTTTAAAACAC
TTGAAATGCTCTATGAAGATATACCGGACACGCTCTCACAACTTATCCGTACAGCCTTTGTACCAAAGGTTGGCAATAAG
TTTATCGTTGCAGACTTTTCTGCTATTGAGGCTCGTGTGCTTTCCTGGCTTGCAGGTGAGGAATGGAGAACCGAAGTATT
TGCAAGCGGCGGTGATATTTATTGCGCATCCGCATCGCAAATGTTTAAAGTTCCTGTTGAAAAGCATGGTGTTAACGGTC
ATCTAAGGCAGAAAGGAAAAATCGCCGAACTGGCACTTGGATACGGTGGATCTGTTGGTGCATTAAAGGCTATGGGTGCG
CTGGAGATGGGACTTGAAGAGGAAGAGTTGAAACCCCTTGTTAATGCCTGGAGAGCATCCAATCCAAACATCGTAAAGTT
CTGGTGGGATGTTGATAGAATAGTTAAGAAATGTATTAAGGAAAATAAGTCACAGGAAACTCATAACATTAAGTTTCATT
GCATGAGCGGAATGTTATTCATTGTTCTTCCTTCCGGTAGACAGCTTGCTTATGTAAAACCTCGTATCGGTGAAAATATC
TTTGGTGGTGAGTCTGTGACTTATGAGGGTGTAGGCGGAACGAAGAAATGGGAAAGAATCGAAAGTTATGGACCCAAATT
TGTAGAGAATATTGTTCAAGCAATCTCCCGTGATATTTTGATGTATGCCATGAAGACACTTAGAACGTGTAGTATAGTGG
CTCATGTGCATGATGAAGTTATCATTGAGGCAGACCCTCGAATGGCAATAGATAGCGTATGTGAGCAGATGAGTAGAGTT
CCTCCCTGGGCAAAGGGGTTGCTCCTTAATGCCGATGGTTATGAATGCGATTTTTATAAAAAAGATTAA

Protein sequence :
MKNLEIDIESYSSVNLQKSGVYRYVEADDFEILLFGYSIDGGEVMVVDLVSGEKIPKEILDALTDEEVTKWAFNAQFERI
CLSRYLSDLGINLDPFHDNHPLSKELARYLNPASWKCSMVWSAYMGLPLSLEGVGAVLGLEKQKLTEGKDLIRYFCVPCT
PTKSNSGRTRNLPSNDEEKWQRFKDYNKRDVETEIQIQQRLIKFPVPEDIWDEYHLDQEINDRGIRVDMDFVKQAIAMDE
ISHEKLMSAMQQLTELDNPNSVQQMKGWLSDNGLETDTLGKKAVAELLKDAPEPLAEVLKLRQQLAKSSVKKYTAMENAI
CADSRARGMFQFYGANRTGRFAGRLVQLQNLPQNHMPDLKEARSIVKSGDFKTLEMLYEDIPDTLSQLIRTAFVPKVGNK
FIVADFSAIEARVLSWLAGEEWRTEVFASGGDIYCASASQMFKVPVEKHGVNGHLRQKGKIAELALGYGGSVGALKAMGA
LEMGLEEEELKPLVNAWRASNPNIVKFWWDVDRIVKKCIKENKSQETHNIKFHCMSGMLFIVLPSGRQLAYVKPRIGENI
FGGESVTYEGVGGTKKWERIESYGPKFVENIVQAISRDILMYAMKTLRTCSIVAHVHDEVIIEADPRMAIDSVCEQMSRV
PPWAKGLLLNADGYECDFYKKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2073 YP_002747288.1 phage DNA polymerase Not tested ¥ÕSeq4 Protein 6e-143 50
MW1425 NP_646242.1 DNA polymerase Not tested ¥ÕSa2 Protein 6e-137 47
polA YP_494120.1 phage related DNA polymerase family A Not tested ¥ÕSa2 Protein 2e-136 47