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Name : Clo1100_3475 (Clo1100_3475) Accession : YP_005149411.1 Strain : Clostridium sp. BNL1100 Genome accession: NC_016791 Putative virulence/resistance : Unknown Product : site-specific recombinase, DNA invertase Pin Function : - COG functional category : - COG ID : - EC number : - Position : 3961343 - 3962992 bp Length : 1650 bp Strand : - Note : PFAM: Recombinase; Resolvase, N terminal domain DNA sequence : ATGCAGACAGCAACAGCGAAAAAGAAAAACATATCGGTTATACCATCCCAGCCGGAATATGACCGGAGCATAAAGCCTCA GTTTAAAACCCTGCGGGTAGCGGCATACTGCCGTGTCAGCACGACACTGGAACAGCAGGAAACCAGTTATGAAGCCCAGG TTTCCTACTACACTGAAAAAATCAAGAGCAACCCCAACTGGAAGCTTGCCGGTATTTATGCCGACGATGGAAAAAGCGCA ACCAACACCAAAAAGCGTGATGACTTCAACGCCATGATCGAAGACTGCATGGCTGGGAAAATCGATATGGTTATCACCAA GTCGGTCAGCCGCTTCGCCAGAAACACGGTAGACAGCCTACAGAATATCCGCAAACTCAAGGAAAAGAATATCGCCGTCT TCTTCGAAAAAGAGGGTGTGAATACACTGGAGGGCACCGGCGAGCTTTTAATCACCATTTTAAGCAGCCAGGCACAGGAA GAAAGCCGGAACTTAAGTGAGAACACCCGGTGGGGTCTGGTCAGACGCTTTGAAAACGGAATCGTCTCGGTCAACCATAA TAAGTTTTTAGGCTACACCAAGGACAAGAACGGTGAGCTGGTCATCGTACCGGAGGAAGCAGAACTGGTCAGACGGATTT TCCGGCTTTACCTCGAAGGGAGCAGCATCGTCCAAATCGGCAAGATTTTAGATGATGAAGGGATCACCACCGTCACCGGA TTAACCCAGTGGTGCCCCGGCGTCATTGATAAAATGCTGAGCAACGAGAAATACATGGGAGATGTCCTTCAGCAGAAAAC TTATACGGTTGATTTCCTCTCCAAAAAGCGCGTTAAGAATAACGGCATCGTCCCCCAATATTATATCCAGGATGACCATG AAGCCATTGTCCCGAAAGAGCTTTACTACCGGGTACAGGAGGAAAAAACCAGGCGGGCAAGCCTGAGCAAATCCGCAGTC GCCAGAAAAGCAAAAAAGGAGAAAAGCAAATACAGCTCCAAATATGCCCTGACAGACATCATGGTATGCAAGGAATGCGG ACAGCCTTACCGCAGACAGATCTGGTCGAAATACGGTCAGAAAAGCGCCGTGTGGCGGTGTGAGAATCGCCTGAAGAACG GCACCAAGAACTGCAGAAACTCCCCGACCTTAAAAGAGGAAGTCCTGCAGGAAGCAGTTATGACTGCCATAAACAGTGTC GTGGAAAACCGCGGCGAGTTTGTCGGCGCCTTCCGTGAAAACGTCATCCAGGTCATCGGCAGCTACTCCACCAAAAATGT ACCGACCGAATATGACGGGCAGATCGAAAAGCTTCAGGGTGAGATGCTGGCCCTGATCGAGGAAAACGCAAAGAAGGGTT CCCTCACAGAAGATTTTGACGAACAGTACCAGAGGATCGCAGAGCAGATCAAGAATTTAAAGCAGAAGAAGCTGGATCTG GTGCGGGAACGGAAACAGGCGGAAAGCTTTCAACAAAGGGTCACCGACATGGATGTCTGCCTGAAGAAAACCACCTGCGA GATACGAGAATTTGACAACGACTTAGTCCGAAGGCTTCTGCAGAACATCAGGGTAATCAACGAGGAACTGATCGAAATCC AATTCAAATCCGGAATCGTGATGAAACAGCGGGTTTCCTATTATGACTAA Protein sequence : MQTATAKKKNISVIPSQPEYDRSIKPQFKTLRVAAYCRVSTTLEQQETSYEAQVSYYTEKIKSNPNWKLAGIYADDGKSA TNTKKRDDFNAMIEDCMAGKIDMVITKSVSRFARNTVDSLQNIRKLKEKNIAVFFEKEGVNTLEGTGELLITILSSQAQE ESRNLSENTRWGLVRRFENGIVSVNHNKFLGYTKDKNGELVIVPEEAELVRRIFRLYLEGSSIVQIGKILDDEGITTVTG LTQWCPGVIDKMLSNEKYMGDVLQQKTYTVDFLSKKRVKNNGIVPQYYIQDDHEAIVPKELYYRVQEEKTRRASLSKSAV ARKAKKEKSKYSSKYALTDIMVCKECGQPYRRQIWSKYGQKSAVWRCENRLKNGTKNCRNSPTLKEEVLQEAVMTAINSV VENRGEFVGAFRENVIQVIGSYSTKNVPTEYDGQIEKLQGEMLALIEENAKKGSLTEDFDEQYQRIAEQIKNLKQKKLDL VRERKQAESFQQRVTDMDVCLKKTTCEIREFDNDLVRRLLQNIRVINEELIEIQFKSGIVMKQRVSYYD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 3e-109 | 49 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 3e-109 | 49 |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-116 | 48 |
