Gene Information

Name : Clo1100_3269 (Clo1100_3269)
Accession : YP_005149220.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3732857 - 3733582 bp
Length : 726 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGGATTTAGGGGTGCATAAAAAGATGGAACCATTTATAAAGGTGGAAAAGTTATCTAGAAAATTTAATGTAGGTGATGA
AGAGATTTATGCTATAAAGAATATAAGCTTTGAAATTAATAAAGGAGAATTTGCTGTTATCCTTGGACCTTCCGGTTCAG
GAAAGAGCACATTATTAAATCTTTTTGGAGGTATGGATCGTGCAACTTCAGGGACATTAGTTGTTAATAATACTAATGTT
ACAAGTTTCTCTGACAGACAATTAAATGATTATCGCAGGAAAGAAGTTGGGTTTGTGTTTCAATTTTACAACCTTCTGCC
AAACTTGACAGCCAGTGAAAATATTGAAATAGCCAGAAAAATTAGTGACAATCCATTAGAAAGTAATGCCTTGGAATTAG
TTGGTCTATCACACAGAGCTAAACATTTTCCGGCAGAACTTTCTGGTGGGGAACAGCAAAGGGTTTCCATAGCGAGAGCA
TTGGCTAAAAGGCCAAAAATACTTTTGTGTGATGAACCTACCGGAGCCTTAGACAGTGAAACGGGTAAGCTAGTTTTAGT
AACACTACATAAAATGTGCAAAGAAAATAATCAGACAGCTATAGTTGTTACACATAATTCCGTAATTGCAGAGGCTGCGG
ACAGGGTTGTACACTTAAGAAATGGAGAGGTATCGAGCATTGAATGTAATAGTACGCCTATCCCAATGGAAGGAGTGGAG
TGGTAA

Protein sequence :
MDLGVHKKMEPFIKVEKLSRKFNVGDEEIYAIKNISFEINKGEFAVILGPSGSGKSTLLNLFGGMDRATSGTLVVNNTNV
TSFSDRQLNDYRRKEVGFVFQFYNLLPNLTASENIEIARKISDNPLESNALELVGLSHRAKHFPAELSGGEQQRVSIARA
LAKRPKILLCDEPTGALDSETGKLVLVTLHKMCKENNQTAIVVTHNSVIAEAADRVVHLRNGEVSSIECNSTPIPMEGVE
W

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1100_3269 YP_005149220.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 4e-57 52
Clo1100_3269 YP_005149220.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 4e-38 43
Clo1100_3269 YP_005149220.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 3e-31 42
Clo1100_3269 YP_005149220.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 1e-36 41