Gene Information

Name : Clo1100_3206 (Clo1100_3206)
Accession : YP_005149158.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Unknown
Product : DNA topoisomerase III
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3656012 - 3658180 bp
Length : 2169 bp
Strand : -
Note : PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid

DNA sequence :
ATGGGTTTTACATTAGTAATAGCAGAAAAACCTTCGGTAGCTAGAGACTTGGCAAAAGTTTTAAACTGCGGACAGAATGC
CAATGGCTATATAATGGGAAAAAAATATATCGTAACCTGGGCTTTGGGACATCTTGTTACCCTTGCAGACCCTGAGGCTT
ATGGCAACAAGTACAAGACATGGAATCTGGAAGACCTGCCAATGCTTCCGAACAAAATGGAACTGGTAGTAATAAAGCAG
ACTGCAAAACAGTATGGTGTAGTCAGAGGGCTTTTGAACAGGGCAGATGTGGACGAGCTTGTAATAGCCACTGATTCGGG
GCGAGAAGGAGAACTTGTTGCCAGGTGGATTATAATGAAAGCAGGGTTTAAAAAGCCCATAAAACGTCTATGGATATCTT
CTCAGACAGACAAAGCCATAAAGGAAGGTTTTGCAAAGTTAAGACCTTCCAAGGAATACGACAACCTGTATTACTCTGCA
CAGAGCAGAGCAGAAGCCGACTGGCTGGTTGGGCTTAACGTCACAAGGGCATTGACCTGTAAATACAACGCACAGCTATC
AGCAGGAAGAGTACAGACACCTACTCTTGCAATGATTGTAGAAAGAGAAGAAGAAATTCGGAAATTCAGGCCTAAAGACT
ACTGGACAATTTCCGCACAGTTTAACGGATTTTCTGTACAGTGGCAGGACGGCAGAACTAACCAAACCAGAACCTTCAAC
AAAGAAGAGGCAGACGGAATAGTAGCAAAAATAACTGGGCAGATAGGTGAAGTCGTTGAAGTAAAAAAAGAAACCAAGAA
AGAATTGCCACCATTGGCCTATGACCTGACAGAGCTGCAAAGAGATGCAAACAAAAAGTTCTCATATTCAGCAAAACAAA
CCCTGAATATCATGCAGCGTCTTTATGAGTCACACAAGCTGGTTACGTATCCCAGAACAGATTCAAGGTACATAACAGAT
GACATTGTACCAACCTTGAACGAACGCTTGAAAAGTATAGCAGTAGGCCCCTATGCAAAGCTTGTGCAGGGAGTTATGAG
AAACAAAATAAGTGTTACAAAAAGGTTTGTGGATAACAGCAAGGTTACAGACCACCATGCCATAATACCAACAGAACAAT
TTGTTGATTTGTCCTCACTGAATTCAGAAGAGAGAAATATATATGACCTTATAGTCAAGAGATTTATAGCAGTACTAAGC
CAGCCCTTTGAATATGAGCAGACTACGGTAAAGCTTAATGTCGCAGGAGAAAGCTTCTATGCAAAAGGAAAGATAGTCAG
GTCATCGGGCTGGAAAACTGTATATGACGGTTTTGGAAAGCTTGATGAAGACAGTGATGAAGATGACAATGACCAGTCCC
TGCCGGATATTCAAAAAGGGCATAAGGCAAAAGTTGTTGCACCTAAAGCAATAAACGGGAAAACTAAGCCACCCGCAAGG
TATACCGAGGCCACTTTACTTTCTGCAATGGAGCATCCGGGTAAGTTTGTAGACAACAAAGCGTTAAAAGAAGCTCTAGA
AAGCACCAGCGGACTTGGTACGCCTGCAACAAGGGCAGATATAATAGAAAAGCTATTTAACACCTTCTATATAGAAAGAA
GAGGCAAAGAAATCTATCCTACCTCAAAGGGAACACAACTTATTTCCCTGGTTCCGGCTGACCTGAAATCTCCTGAGCTT
ACCGCAAAGTGGGAGCAGCAGCTTTCATTGATTAGCAAAGGTAAGGCCAACTCAAATGCATTTGTAGGTGAAATGAAAAA
TTATGCAAAAAAATTGGTGGGAGCAGTCATAGCAAGCTCAGAGCAGTTCAAACACGATAATGTAACAAGGGAAAAGTGTC
CCGAATGTGGAAAATACCTTTTGGAAGTAAACGGCAAGAAGGGGAAAATGCATGTCTGCCCTGACAGAGAATGCGGATAT
AGAAAATCGGTAACCGTGATATCAAATGCCAGGTGTCCCGAATGTCACAAGAAGATGGAAATCAGGGGAGAAGGCGAGAA
TAAATCCTTCTACTGTTCCTGCGGCTACAGGGAGAAGCTGGATGCCTTTAAAAAACGCAAGGGTGAACAGGTAGATAAAA
AGGATGTCGCCAGATTTATGAGACAACAGGATAAGGACGAAAGTATAAATTCAGCTCTTGCCGATGCATTGGCCAAGTGG
AAGAAATAA

Protein sequence :
MGFTLVIAEKPSVARDLAKVLNCGQNANGYIMGKKYIVTWALGHLVTLADPEAYGNKYKTWNLEDLPMLPNKMELVVIKQ
TAKQYGVVRGLLNRADVDELVIATDSGREGELVARWIIMKAGFKKPIKRLWISSQTDKAIKEGFAKLRPSKEYDNLYYSA
QSRAEADWLVGLNVTRALTCKYNAQLSAGRVQTPTLAMIVEREEEIRKFRPKDYWTISAQFNGFSVQWQDGRTNQTRTFN
KEEADGIVAKITGQIGEVVEVKKETKKELPPLAYDLTELQRDANKKFSYSAKQTLNIMQRLYESHKLVTYPRTDSRYITD
DIVPTLNERLKSIAVGPYAKLVQGVMRNKISVTKRFVDNSKVTDHHAIIPTEQFVDLSSLNSEERNIYDLIVKRFIAVLS
QPFEYEQTTVKLNVAGESFYAKGKIVRSSGWKTVYDGFGKLDEDSDEDDNDQSLPDIQKGHKAKVVAPKAINGKTKPPAR
YTEATLLSAMEHPGKFVDNKALKEALESTSGLGTPATRADIIEKLFNTFYIERRGKEIYPTSKGTQLISLVPADLKSPEL
TAKWEQQLSLISKGKANSNAFVGEMKNYAKKLVGAVIASSEQFKHDNVTREKCPECGKYLLEVNGKKGKMHVCPDRECGY
RKSVTVISNARCPECHKKMEIRGEGENKSFYCSCGYREKLDAFKKRKGEQVDKKDVARFMRQQDKDESINSALADALAKW
KK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
topB-2 NP_815968.1 DNA topoisomerase III Not tested Not named Protein 8e-105 42
EFAU085_00720 YP_008394244.1 DNA topoisomerase III Not tested Not named Protein 4e-105 41