Gene Information

Name : Clo1100_2906 (Clo1100_2906)
Accession : YP_005148863.1
Strain : Clostridium sp. BNL1100
Genome accession: NC_016791
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3333632 - 3334318 bp
Length : 687 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGAAAGAAGTTTTAAGAATTGAAAATTTGACAAAGAGATATGGTAAAGGACAAAATGAGGTAACCGCCGTTGACAATAT
AAGTTTTTCAGTTGAAAAAGGCGAGTTTGTTGCAATTATAGGACCAAGCGGCTCCGGTAAAAGTACATTGCTGCATCTAA
TCGGAGGAGTTGATAAACCCACATCGGGTAAAGTATATATTGACGACAAGGATATTTACGGACTTAGGGAAAAGGATTTA
TCCATACTTAGAAGAAGAAAAGTGGGTTTTGTATTTCAGGCGTATAACCTTATCCCCGTATTGACAGCAGAAGAAAATAT
TCTCATGCCGCTTCTTCTGGACAACAGAAAGGAAGATAAGCAATACATTGATGAACTGCTTAAAATACTTGATTTAAAAG
ACAGAAGAAAACACCTGCCATCAGAACTTTCAGGAGGGCAGCAGCAGCGTGTTTCAATAGGCAGGGCACTTGCAAACAAA
CCATCAATCATTCTCGCTGATGAGCCTACAGGAAACCTTGATACAAAAAACTCCAGAGAGGTTCTTGAATTGTTAAAATA
CTCTGCAAAAAAATATAACCAGACACTTATACTCATTTCACATGATATGAATATAGCAAGCATGGCAGACAGAGTCATAA
GTATAGTTGACGGTAAAATCTCTTCCGATGAGGTGGTGAGACAATGA

Protein sequence : 
MKEVLRIENLTKRYGKGQNEVTAVDNISFSVEKGEFVAIIGPSGSGKSTLLHLIGGVDKPTSGKVYIDDKDIYGLREKDL
SILRRRKVGFVFQAYNLIPVLTAEENILMPLLLDNRKEDKQYIDELLKILDLKDRRKHLPSELSGGQQQRVSIGRALANK
PSIILADEPTGNLDTKNSREVLELLKYSAKKYNQTLILISHDMNIASMADRVISIVDGKISSDEVVRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 5e-33 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clo1100_2906 YP_005148863.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 1e-57 59
Clo1100_2906 YP_005148863.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 3e-53 54
Clo1100_2906 YP_005148863.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-38 47
Clo1100_2906 YP_005148863.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 4e-32 42
Clo1100_2906 YP_005148863.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-30 41